Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01365 ATGGTGCATGATGACGATGAAGCTGATGATGAAACATTTGCTTCACATGCTGATGAATATGCAAAAAACAGAGATGTTCCATCTAGTGCTGCTCTACCAATTATACGACCAGCCTTAGGTAGGCAGCAGTCTGTGTCAGACAGGGCAAAGAGTGCAATGCAAGGATATCTGAATCACTTTTTGGGAAATATCAGTATTGTTAACTCTCCAGAGGTCTGCAAGTTTTTAGAGGTATCGAAGCTATCTTTTTTGCCTGAATATGGACCTAAGCTGAAAGAAGATTATGTAATGGTGAAACATCTGCCCAAAATTCCAAAGGATGATGATTCCAGAAAGTGTTGTACATCTAGCTGTTTTAGTTGTTGTAATGACAACTGGCAAAAGGTATGGGCTGTATTGAAACCTGGATTCTTGGCATTGCTGGCAGATCCTTTTGATAAGCAGCCCTTAGACATTATTGTCTTTGATGTGCTGCCTCCATCGGATGGGAATGGGGATGGTCGTCTGTCACTGGCTAGTGAAATAAAGGAACGAAATCCTTTACGCCATTCATTCAAGGTGACTTGCGGGATCCGGAGCATTAGAATTAGAGGGAAAAGTAGCAGTAAAGTTAAAGATTGGGTAGCAGCAATTAATGATGCTGGACTTAGGCCTCCTGAAGGCTGGTGTTATCCTCACCGCTATGGGTCATTTGCTCCTCCAAGAGGCTTAATTGAAGATGGTAGTCAAGCCCAATGGTTCGTGGATGGGCAAGCAGCATTTGATGCAATTGCTTCTTCAATTGAGGATGCAAGATCAGAGATATTCATCTGTGGATGGTGGGTATGCCCAGAACTGTATCTCAGGCGACCTTTTGACATTCATGCTTCATCAAGACTTGATAATTTGTTGGAAGCAAAGGCTAAGCAAGGGGTTCAGATCTACATTCTTCTGTACAAAGAGGTGGCTCTTGCTTTGAAAATCAACAGTGTCTATAGCAAGAGAAAGCTTCTTAGCATTCATGAGAACGTGAGGGTACTACGCTATCCTGATCACTTTTCTTCTGGTGTTTATCTATGGTCTCACCATGAAAAACTGGTCATTGTCGATAACCATATTTGCTTCATTGGAGGATTGGATTTGTGCTTTGGCCGTTATGACTCATCTGAGCATAAAGTGGGGGATTGCCCTCCTCTAATCTGGCCTGGAAAGGACTTTTATAACCCTAGGGAATCTGAACCTAATTCATGGGAAGATACAATGAAAGATGAATTGGATCGTAGAAATTATCCTCGTATGCCTTGGCATGATGTTCATTGCGCCCTTTGGGGACCACCTTGTCGTGATATTGCTCGGCACTTTGTTCAAAGATGGAATTATGCAAAGAGGAATAAAGCTCCGTATGAGGAAGCAATACCTTTACTTATGCCTCAGCATCATATGGTTATTCCACATTACTTGGGAAGAAGCACTGAGATGGAGATTGAAAACAATAATGCTGAGAATCATAGAGTCATCAAGAGAGAAGATTCATTTTCTTCATTATCCCAAGAACAAGATGTTCCTCTACTTTTGACTCGTGATGAGTCTGAAGGAGACCCCAAAATGAACGGGTTAAACTCATTCATACATCACGTTGATAAGCCAATAAAGGTCGGTGGTGGTCTTCCTTTCTCTTTTCGGAGGGTGAAAATTGAAGCTGTTGGTCAAGACACCCCAATGAAGGGCTTTGTAGATGATCTTGGATATATGCATTATGATGAGAAAAAGTCTCTGGATAGAGTGCCTCATGTTGAGCAACAAAGTACTGGTCCAGAATGGTGGGAAACACAAGAGCGTGGTGATCAGGGAGATTTTGCAGATGAATCAGGGCAAGTTGGCCCTCGTGTTTCCTGCCGTTGTCAGGTTATTAGGAGCGTCAGTCAATGGTCTGCTGGAACAAGCCAAACGGAAGAGAGCATACACAATGCCTATTGCTCTCTTATTGAAAAAGCAGAACACTTCATCTACATTGAGAATCAATTTTTTATCTCAGGTCTTTCTGGAGATGAAATGATTCGGAACCGTGTTTTGGAAGCTTTGTATCGACGGATTATGCTAGCATACAATGAAAATAAATCCTTTCGGGTTATCATTGTCATACCTCTCCTACCTGGCTTCCAGGGGGGTCTTGATGATAGTGGTGCAGCATCTGTGAGAGCAATAATGCACTGGCAGTATCGAACCATTTGTAGAGGGCAGAATTCTATATTACATAATCTTTATGAACTTCTTGGTTCAAAAATACATGACTACATCTCTTTTTTTGGCTTGAGGTCTTATGGTAGACTTTTTGACGGTGGTCCTGTAGCAACCAGCCAGGTGTATGTTCACAGTAAAATCATGATTGTTGATGATCGCATAAGTTTGATTGGATCTGCTAATATTAATGATAGGAGCCTGCTTGGATCTAGAGATTCTGAGATTGGAGTAGTTATAGAAGACAGAGAGCTCATTGGTTCTTATATGGATGGAAAGCCTTGGAAAGCAGGAAAGTTCTCCTTGACTCTCCGTTTGTCATTATGGTCTGAGCACTTGGGTCTACCAGCAGGAGAGGTCAATCAAATAATGGACCCGATTATTGAATCATCTTACAAAGATATTTGGATGGCAGCAGCAAAGACAAATACTGCAATTTACCAGGATGTCTTTTCTTGTGTACCTAATGATCTAATCCACACCAGACTTGCTTTCAGACAGAGTGTAGCCTTTTGGAAAGAAAGAATTGGTCACACAACCATTGATTTAGGAATAGCGCCGCAAAAATTAGAATCCTATCATGATGGAGATATCAAGAGCACTGATCCATTGGAGAGATTAGCATCAGTGAGGGGTCATCTTGTTTCTTTTCCTTTGGAGTTCATGTGCCAAGAAAGTCTAAGACCTGGTTTCAGTGAAAGCGAATATTACGCCGCTGCTCAAGTTTTCCACTGA 2952 0.418 MVHDDDEADDETFASHADEYAKNRDVPSSAALPIIRPALGRQQSVSDRAKSAMQGYLNHFLGNISIVNSPEVCKFLEVSKLSFLPEYGPKLKEDYVMVKHLPKIPKDDDSRKCCTSSCFSCCNDNWQKVWAVLKPGFLALLADPFDKQPLDIIVFDVLPPSDGNGDGRLSLASEIKERNPLRHSFKVTCGIRSIRIRGKSSSKVKDWVAAINDAGLRPPEGWCYPHRYGSFAPPRGLIEDGSQAQWFVDGQAAFDAIASSIEDARSEIFICGWWVCPELYLRRPFDIHASSRLDNLLEAKAKQGVQIYILLYKEVALALKINSVYSKRKLLSIHENVRVLRYPDHFSSGVYLWSHHEKLVIVDNHICFIGGLDLCFGRYDSSEHKVGDCPPLIWPGKDFYNPRESEPNSWEDTMKDELDRRNYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPYEEAIPLLMPQHHMVIPHYLGRSTEMEIENNNAENHRVIKREDSFSSLSQEQDVPLLLTRDESEGDPKMNGLNSFIHHVDKPIKVGGGLPFSFRRVKIEAVGQDTPMKGFVDDLGYMHYDEKKSLDRVPHVEQQSTGPEWWETQERGDQGDFADESGQVGPRVSCRCQVIRSVSQWSAGTSQTEESIHNAYCSLIEKAEHFIYIENQFFISGLSGDEMIRNRVLEALYRRIMLAYNENKSFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSILHNLYELLGSKIHDYISFFGLRSYGRLFDGGPVATSQVYVHSKIMIVDDRISLIGSANINDRSLLGSRDSEIGVVIEDRELIGSYMDGKPWKAGKFSLTLRLSLWSEHLGLPAGEVNQIMDPIIESSYKDIWMAAAKTNTAIYQDVFSCVPNDLIHTRLAFRQSVAFWKERIGHTTIDLGIAPQKLESYHDGDIKSTDPLERLASVRGHLVSFPLEFMCQESLRPGFSESEYYAAAQVFH 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01365 983 PIRSF PLD_euk 478 983 IPR016555 GO:0004630|GO:0006654|GO:0048017
Arst4g01365 983 PIRSF PLD_euk 3 497 IPR016555 GO:0004630|GO:0006654|GO:0048017
Arst4g01365 983 PIRSF PLD_euk 478 983 IPR016555 GO:0004630|GO:0006654|GO:0048017
Arst4g01365 983 PIRSF PLD_euk 3 497 IPR016555 GO:0004630|GO:0006654|GO:0048017
Arst4g01365 983 MobiDBLite consensus disorder prediction 1 20 - -
Arst4g01365 983 Pfam Phospholipase D Active site motif 351 378 IPR001736 GO:0003824
Arst4g01365 983 CDD PLDc_vPLD1_2_yPLD_like_2 639 823 - -
Arst4g01365 983 Gene3D Endonuclease Chain A 237 476 - -
Arst4g01365 983 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 351 378 IPR001736 GO:0003824
Arst4g01365 983 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 779 806 IPR001736 GO:0003824
Arst4g01365 983 SUPERFAMILY Phospholipase D/nuclease 207 471 - -
Arst4g01365 983 Gene3D Endonuclease Chain A 580 839 - -
Arst4g01365 983 PANTHER PHOSPHOLIPASE D 49 971 IPR015679 -
Arst4g01365 983 SMART PH_update 90 218 IPR001849 -
Arst4g01365 983 CDD PLDc_vPLD1_2_yPLD_like_1 244 389 - -
Arst4g01365 983 FunFam Phospholipase 613 833 - -
Arst4g01365 983 Gene3D - 117 216 IPR011993 -
Arst4g01365 983 SUPERFAMILY PH domain-like 122 214 - -
Arst4g01365 983 SMART pld_4 351 378 IPR001736 GO:0003824
Arst4g01365 983 SMART pld_4 779 806 IPR001736 GO:0003824
Arst4g01365 983 Pfam PLD-like domain 772 826 IPR025202 -
Arst4g01365 983 SUPERFAMILY Phospholipase D/nuclease 620 829 - -
Arst4g01365 983 CDD PH_PLD 67 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01365 Arst-Chr4 15621678 15632844 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01365 2 859 Phospholipase D Gene Family (Wang group) AT3G16785 73.933 0.0 1229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01365 K01115 - gmx:100780514 1785.77