Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01364 ATGGCGACTGAGCAGTTAATGTCCGACGGCGGCGCCCACCGTTACTTCCCTATGAAACCGGAGCAGCCGCCGTCTCCTCCGGCGGCGGCGGAAGAGATGTCGTCTGTTCCGTCTTTCCGACATGGAGGCGCCGGCGAGGCTACTCGGATTTTCGACGAACTTCCCAAGGCCACCATCGTCTCCGTCTCTCGCCCTGACGCCAGCGACATAAGCCCTATGCAGCTCTCTTACACCATTCGGTTTCAGTACAAACAGTTCAAGTGGGAGCTAGTGAAGAAAGCTTCTCAAGTATTTTATTTGCATTTTGCGTTAAAGAAGCGTGCCTTTTTTGAGGAAATTCATGAGAAGCAAGAACAGGTTAAAGAATGGCTTCAAAATCTAGGAATAGGAGAGCACACTACTATGGTGCATGATGACGATGAAGCTGATGATGAAACATTTGCTTCACATGCTGATGAATATGCAAAAAACAGAGATGTTCCATCTAGTGCTGCTCTACCAATTATACGACCAGCCTTAGGTAGGCAGCAGTCTGTGTCAGACAGGGCAAAGAGTGCAATGCAAGGATATCTGAATCACTTTTTGGGAAATATCAGTATTGTTAACTCTCCAGAGGTCTGCAAGTTTTTAGAGGTATCGAAGCTATCTTTTTTGCCTGAATATGGACCTAAGCTGAAAGAAGATTATGTAATGGTGAAACATCTGCCCAAAATTCCAAAGGATGATGATTCCAGAAAGTGTTGTACATCTAGCTGTTTTAGTTGTTGTAATGACAACTGGCAAAAGGTATGGGCTGTATTGAAACCTGGATTCTTGGCATTGCTGGCAGATCCTTTTGATAAGCAGCCCTTAGACATTATTGTCTTTGATGTGCTGCCTCCATCGGATGGGAATGGGGATGGTCGTCTGTCACTGGCTAGTGAAATAAAGGAACGAAATCCTTTACGCCATTCATTCAAGGTGACTTGCGGGATCCGGAGCATTAGAATTAGAGGGAAAAGTAGCAGTAAAGTTAAAGATTGGGTAGCAGCAATTAATGATGCTGGACTTAGGCCTCCTGAAGGCTGGTGTTATCCTCACCGCTATGGGTCATTTGCTCCTCCAAGAGGCTTAATTGAAGATGGTAGTCAAGCCCAATGGTTCGTGGATGGGCAAGCAGCATTTGATGCAATTGCTTCTTCAATTGAGGATGCAAGATCAGAGATATTCATCTGTGGATGGTGGGTATGCCCAGAACTGTATCTCAGGCGACCTTTTGACATTCATGCTTCATCAAGACTTGATAATTTGTTGGAAGCAAAGGCTAAGCAAGGGGTTCAGATCTACATTCTTCTGTACAAAGAGGTGGCTCTTGCTTTGAAAATCAACAGTGTCTATAGCAAGAGAAAGCTTCTTAGCATTCATGAGAACGTGAGGGTACTACGCTATCCTGATCACTTTTCTTCTGGTGTTTATCTATGGTCTCACCATGAAAAACTGGTCATTGTCGATAACCATATTTGCTTCATTGGAGGATTGGATTTGTGCTTTGGCCGTTATGACTCATCTGAGCATAAAGTGGGGGATTGCCCTCCTCTAATCTGGCCTGGAAAGGACTTTTATAACCCTAGGGAATCTGAACCTAATTCATGGGAAGATACAATGAAAGATGAATTGGATCGTAGAAATTATCCTCGTATGCCTTGGCATGATGTTCATTGCGCCCTTTGGGGACCACCTTGTCGTGATATTGCTCGGCACTTTGTTCAAAGATGGAATTATGCAAAGAGGAATAAAGCTCCGTATGAGGAAGCAATACCTTTACTTATGCCTCAGCATCATATGGTTATTCCACATTACTTGGGAAGAAGCACTGAGATGGAGATTGAAAACAATAATGCTGAGAATCATAGAGTCATCAAGAGAGAAGATTCATTTTCTTCATTATCCCAAGAACAAGATGTTCCTCTACTTTTGACTCGTGATGAGTCTGAAGGAGACCCCAAAATGAACGGGTTAAACTCATTCATACATCACGTTGATAAGCCAATAAAGGTCGGTGGTGGTCTTCCTTTCTCTTTTCGGAGGGTGAAAATTGAAGCTGTTGGTCAAGACACCCCAATGAAGGGCTTTGTAGATGATCTTGGATATATGCATTATGATGAGAAAAAGTCTCTGGATAGAGTGCCTCATGTTGAGCAACAAAGTACTGGTCCAGAATGGTGGGAAACACAAGAGCGTGGTGATCAGGGAGATTTTGCAGATGAATCAGGGCAAGTTGGCCCTCGTGTTTCCTGCCGTTGTCAGGTTATTAGGAGCGTCAGTCAATGGTCTGCTGGAACAAGCCAAACGGAAGAGAGCATACACAATGCCTATTGCTCTCTTATTGAAAAAGCAGAACACTTCATCTACATTGAGAATCAATTTTTTATCTCAGGTCTTTCTGGAGATGAAATGATTCGGAACCGTGTTTTGGAAGCTTTGTATCGACGGATTATGCTAGCATACAATGAAAATAAATCCTTTCGGGTTATCATTGTCATACCTCTCCTACCTGGCTTCCAGGGGGGTCTTGATGATAGTGGTGCAGCATCTGTGAGAGCAATAATGCACTGGCAGTATCGAACCATTTGTAGAGGGCAGAATTCTATATTACATAATCTTTATGAACTTCTTGGTTCAAAAATACATGACTACATCTCTTTTTTTGGCTTGAGGTCTTATGGTAGACTTTTTGACGGTGGTCCTGTAGCAACCAGCCAGGTGTATGTTCACAGTAAAATCATGATTGTTGATGATCGCATAAGTTTGATTGGATCTGCTAATATTAATGATAGGAGCCTGCTTGGATCTAGAGATTCTGAGATTGGAGTAGTTATAGAAGACAGAGAGCTCATTGGTTCTTATATGGATGGAAAGCCTTGGAAAGCAGGAAAGTTCTCCTTGACTCTCCGTTTGTCATTATGGTCTGAGCACTTGGGTCTACCAGCAGGAGAGGTCAATCAAATAATGGACCCGATTATTGAATCATCTTACAAAGATATTTGGATGGCAGCAGCAAAGACAAATACTGCAATTTACCAGGATGTCTTTTCTTGTGTACCTAATGATCTAATCCACACCAGACTTGCTTTCAGACAGAGTGTAGCCTTTTGGAAAGAAAGAATTGGTCACACAACCATTGATTTAGGAATAGCGCCGCAAAAATTAGAATCCTATCATGATGGAGATATCAAGAGCACTGATCCATTGGAGAGATTAGCATCAGTGAGGGGTCATCTTGTTTCTTTTCCTTTGGAGTTCATGTGCCAAGAAAGTCTAAGACCTGGTTTCAGTGAAAGCGAATATTACGCCGCTGCTCAAGTTTTCCACTGA 3354 0.4296 MATEQLMSDGGAHRYFPMKPEQPPSPPAAAEEMSSVPSFRHGGAGEATRIFDELPKATIVSVSRPDASDISPMQLSYTIRFQYKQFKWELVKKASQVFYLHFALKKRAFFEEIHEKQEQVKEWLQNLGIGEHTTMVHDDDEADDETFASHADEYAKNRDVPSSAALPIIRPALGRQQSVSDRAKSAMQGYLNHFLGNISIVNSPEVCKFLEVSKLSFLPEYGPKLKEDYVMVKHLPKIPKDDDSRKCCTSSCFSCCNDNWQKVWAVLKPGFLALLADPFDKQPLDIIVFDVLPPSDGNGDGRLSLASEIKERNPLRHSFKVTCGIRSIRIRGKSSSKVKDWVAAINDAGLRPPEGWCYPHRYGSFAPPRGLIEDGSQAQWFVDGQAAFDAIASSIEDARSEIFICGWWVCPELYLRRPFDIHASSRLDNLLEAKAKQGVQIYILLYKEVALALKINSVYSKRKLLSIHENVRVLRYPDHFSSGVYLWSHHEKLVIVDNHICFIGGLDLCFGRYDSSEHKVGDCPPLIWPGKDFYNPRESEPNSWEDTMKDELDRRNYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPYEEAIPLLMPQHHMVIPHYLGRSTEMEIENNNAENHRVIKREDSFSSLSQEQDVPLLLTRDESEGDPKMNGLNSFIHHVDKPIKVGGGLPFSFRRVKIEAVGQDTPMKGFVDDLGYMHYDEKKSLDRVPHVEQQSTGPEWWETQERGDQGDFADESGQVGPRVSCRCQVIRSVSQWSAGTSQTEESIHNAYCSLIEKAEHFIYIENQFFISGLSGDEMIRNRVLEALYRRIMLAYNENKSFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSILHNLYELLGSKIHDYISFFGLRSYGRLFDGGPVATSQVYVHSKIMIVDDRISLIGSANINDRSLLGSRDSEIGVVIEDRELIGSYMDGKPWKAGKFSLTLRLSLWSEHLGLPAGEVNQIMDPIIESSYKDIWMAAAKTNTAIYQDVFSCVPNDLIHTRLAFRQSVAFWKERIGHTTIDLGIAPQKLESYHDGDIKSTDPLERLASVRGHLVSFPLEFMCQESLRPGFSESEYYAAAQVFH 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01364 1117 MobiDBLite consensus disorder prediction 1 37 - -
Arst4g01364 1117 PANTHER PHOSPHOLIPASE D 180 1105 IPR015679 -
Arst4g01364 1117 Gene3D Endonuclease Chain A 715 973 - -
Arst4g01364 1117 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 485 512 IPR001736 GO:0003824
Arst4g01364 1117 Gene3D Endonuclease Chain A 371 610 - -
Arst4g01364 1117 SUPERFAMILY Phospholipase D/nuclease 341 605 - -
Arst4g01364 1117 Pfam PLD-like domain 906 960 IPR025202 -
Arst4g01364 1117 SUPERFAMILY Phospholipase D/nuclease 754 963 - -
Arst4g01364 1117 CDD PLDc_vPLD1_2_yPLD_like_2 773 957 - -
Arst4g01364 1117 SUPERFAMILY PH domain-like 256 348 - -
Arst4g01364 1117 PIRSF PLD_euk 55 617 IPR016555 GO:0004630|GO:0006654|GO:0048017
Arst4g01364 1117 PIRSF PLD_euk 612 1117 IPR016555 GO:0004630|GO:0006654|GO:0048017
Arst4g01364 1117 FunFam Phospholipase 747 967 - -
Arst4g01364 1117 PIRSF PLD_euk 55 617 IPR016555 GO:0004630|GO:0006654|GO:0048017
Arst4g01364 1117 PIRSF PLD_euk 612 1117 IPR016555 GO:0004630|GO:0006654|GO:0048017
Arst4g01364 1117 CDD PH_PLD 201 348 - -
Arst4g01364 1117 Pfam Phospholipase D Active site motif 485 512 IPR001736 GO:0003824
Arst4g01364 1117 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 913 940 IPR001736 GO:0003824
Arst4g01364 1117 Gene3D - 251 350 IPR011993 -
Arst4g01364 1117 SMART pld_4 485 512 IPR001736 GO:0003824
Arst4g01364 1117 SMART pld_4 913 940 IPR001736 GO:0003824
Arst4g01364 1117 SMART PH_update 224 352 IPR001849 -
Arst4g01364 1117 CDD PLDc_vPLD1_2_yPLD_like_1 378 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01364 Arst-Chr4 15621678 15633325 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01364 1 997 Phospholipase D Gene Family (Wang group) AT3G16785 73.386 0.0 1407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01364 K01115 - gmx:100780514 1980.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g01364 4 15621678 15633325 Arst4g01364 4 15621678 15633325 ECH