Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01352 ATGTTAAACATGATGAACAATAATAGGAATAACAACCCTGCACCACTTTGCCCTCCATTACAAGTCCAATATGATTATCATCATGGATATGATTATTCTTCCTTATTGTTCTCCTCATCATACTCGTTGGCGGCACCAGGTAACATTAGTGCCGCCACTGCAGCTCCTAACTCAGCATCCTCTCCTCACTCTGGCACCGGAAAGTACCGAGGTACGCGGTGTCGGAGCGGAAAGTGGGTGTCAGAGATAAGAGAGCCACGGAAGTCAAACCGCATATGGCTTGGGACATACCCCACACCGGAGATGGCTGCCACCGCTTACGATGTAGCGGCTCTTGCATTAAGAGGTCCTAATGCCTATCTCAACTTTCCCAATTTCATGCTCGCTTACCCTATTCCTGCCTCCTTGTCCGCCCCTGATATTCGCGCTGCCGCGGCCGCTGCGGCCGAGGCGAGGCTTGTTACATCACCACCGCCACCTCCACTGCCAATACCACCGGAAAACCCTTCAGAGATTCTGGAGGAATATTTCGATGAAGAGGAGGTATGGAATATGCCGAGCTTGATCGAAGACATGGCCAGGGGAATGCTTATGAGTCCCCCAAGAATGGTGGAGTCCTTCTCCTCTGAAGACTTTGCCGAGTGCTATTCGGATCTTTATAGTACTCTTTGGAGTACTTGGTAA 684 0.5029 MLNMMNNNRNNNPAPLCPPLQVQYDYHHGYDYSSLLFSSSYSLAAPGNISAATAAPNSASSPHSGTGKYRGTRCRSGKWVSEIREPRKSNRIWLGTYPTPEMAATAYDVAALALRGPNAYLNFPNFMLAYPIPASLSAPDIRAAAAAAAEARLVTSPPPPPLPIPPENPSEILEEYFDEEEVWNMPSLIEDMARGMLMSPPRMVESFSSEDFAECYSDLYSTLWSTW 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01352 227 Gene3D AP2/ERF domain 68 125 IPR036955 GO:0003700|GO:0006355
Arst4g01352 227 ProSiteProfiles AP2/ERF domain profile. 68 124 IPR001471 GO:0003700|GO:0006355
Arst4g01352 227 FunFam Ethylene-responsive transcription factor 2 68 125 - -
Arst4g01352 227 SMART rav1_2 68 130 IPR001471 GO:0003700|GO:0006355
Arst4g01352 227 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 56 191 - -
Arst4g01352 227 SUPERFAMILY DNA-binding domain 68 125 IPR016177 GO:0003677
Arst4g01352 227 MobiDBLite consensus disorder prediction 52 67 - -
Arst4g01352 227 CDD AP2 68 125 IPR001471 GO:0003700|GO:0006355
Arst4g01352 227 MobiDBLite consensus disorder prediction 52 73 - -
Arst4g01352 227 Pfam AP2 domain 69 116 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01352 Arst-Chr4 15129617 15130808 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01352 69 211 AP2-EREBP Transcription Factor Family AT5G52020 55.556 1.89e-41 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst4g01352 AP2 7.1e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01352 - - adu:107466884 176.792