Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01317 ATGTCAGAAGGAACCAGTCTGGTGCTGGAATCGTCCGAGAATTGCACAGATTTGTCTCAGGATGAGATTGGCACGATTGAGGAAACACCAGAGGAAACAATTTTATCAAGACAGACTTCTGTCAACCTTGTTCCTTTTATTGGTCAGAGATTTGTTTCTCAAGAAGCTGCTTATGAATTCTATTGCAGTTTTGCTAAGCAGTGTGGCTTTTCTATTCGGCGACACCGCACTCGAGGGAAGGACGGTGTTGGTCGCGGAGTCACAAGGAGGGATTTTACTTGCCATCGTGGTGGATACCCCCAGGTCAAACCTTCTGATGATGGGAAGATGCAAAGGAACCGCAAATCATCTCGTTGTGGTTGCCAAGCATACTTGCGTATTGTTAAAAAGTCGGATTTTGATGTCCCTGAGTGGCGTGTTACTGGCTTTAGCAATGTCCACAATCACGAGTTGTTAAAATCTAATGAGGTGCGGCTTCTTCCGGCATACTGCACAATATCTCCTGATGACAAGAGCCGCATATGCATGTTTGCTAAAGCAGGGATGTCAGTGAGGCAAATGTTAAGATTGATGGAACTAGAGAAAGGCATCAAAGTCGGTTGCCTTCCTTTTACGGAAATGGATGTGAGAAACCTGTTGCAGTCTTTCAGAAATGTTGAAAGAGACAATGATGCCATTGATCTAATTGCTATGTGCAAGAGATTAAAAGATGAAAATCCAAATTTCAAGTATGAATTCAAGATAGACAGTAATAACAGGCTGGAGCACATTGCATGGTCTTACAGCTCATCTGTTCAATCGTACGAGTCATTTGGAGATGCTGTGGTTTTTGACACCACACACCGAGTAGACGCCTATGACATGCTGTTGGGAATCTGGCTTGGAGTGGACAATCATGGGATGACTTGTTTCTTTGGTTGCACACTTCTACGGGATGAAAATATGCAGTCTTTTTCATGGGCTTTAAAGGCTTTCATGGGCTTCATGAAAGGAAAATCTCCGCAAACAATATTAACTGATCATAACATGTGGCTGAAAGAAGCTATTGCTGTTGAAATGCCAGAAACAAAACATGCCTTTTGTATATGGCATATTCTTTCTAAGTTGTCTGACTGGTTTTCTGTTCTACTTGGATCTCATTATGACGAGTGGAAAGCTGACTTCCTCCAGCTCTACAATTTGGAACTGATGGAAGATTTCGAAGAAGGGTGGAGGCAAATGATTGATAAATATCGACTCCACACGAACAAACATATTATTAGCCTACATTCATTAAGGATGTTTTGGGCTCTACCATTCTTGAGGCGTTACTTTTTTGCAGGATTGACCAGCACAAGTCAATCCGAGTCCATTAATGCTTTCATCCAACGGTTCTTGAGCGCTCAATCTCAATTGGACCACTTTGTTGAGCAAGTCTGTGATGTGGCAGATATTGTTGATTTTAACGACCGGGTTGGATTGAAGCAAAAAATGCAACGGAAAGCGCAGAAAGTGTGCCTCAAAACAGGCTCGCCTGTCGAATCTCATGCTGCCACTGTCCTTACACCTTATGCCTTAAGTAAACTCCAGGATGAGCTAGTTTTGGCGCCGCAGTATGCATCCTTTCTGGTGGATGAAGGTTGCTTCCAGGTCAGACATCACACTCAGACAGACGGAGGCTGCAAAGTATTTTGGGTTCCTTGTCAAGCGCACATTACCTGCAGCTGCCACCTGTTCGAGTTTTCAGGAACCTTATGCAGACATGTTCTACGTGTCATGTCGACCAATAACTGTTTTCACATCCCCGACCAATACCTACCCACCCGTTGGAGAGGTGGTGGTTTGTCTTCTGTCAACCAGTTTCGGGGCGTAACAACAAGGGATCAGCCTGAAAGGATGCAATTTTTGGAATCCATGGTTTCAACGCTTATAATGGAATCCATTGAAACAGAGGAACGCCTTGATGTTGCTTGCGAGCAAATGTCTGTGGCGCTGTCACGTATCAAAGCCCTTCCAAGGCCGCCGGCACATGGGGTGAATGACATCACATATAGTTATTCGTCGGATTCATTGATCCTACCAGAGGTAGAAGATACTGATGGAATAATTCATGGTTTTGCAAACCCCCACGATAGTATTGCCTTAGGAAAGCTAAAGGAGAGAAGGGCGAGGGATGTCGTTGATGTCACGAGGAAGCGTAGGCAGTTTCCGGGGCCGTTGTGTGGGCAATATGTGCATGATCCTTCCGATTGCTCAATAATGGCAGGTGATAATCTAGGTGGAGATGGATTAGGGTATTTGTAG 2283 0.4442 MSEGTSLVLESSENCTDLSQDEIGTIEETPEETILSRQTSVNLVPFIGQRFVSQEAAYEFYCSFAKQCGFSIRRHRTRGKDGVGRGVTRRDFTCHRGGYPQVKPSDDGKMQRNRKSSRCGCQAYLRIVKKSDFDVPEWRVTGFSNVHNHELLKSNEVRLLPAYCTISPDDKSRICMFAKAGMSVRQMLRLMELEKGIKVGCLPFTEMDVRNLLQSFRNVERDNDAIDLIAMCKRLKDENPNFKYEFKIDSNNRLEHIAWSYSSSVQSYESFGDAVVFDTTHRVDAYDMLLGIWLGVDNHGMTCFFGCTLLRDENMQSFSWALKAFMGFMKGKSPQTILTDHNMWLKEAIAVEMPETKHAFCIWHILSKLSDWFSVLLGSHYDEWKADFLQLYNLELMEDFEEGWRQMIDKYRLHTNKHIISLHSLRMFWALPFLRRYFFAGLTSTSQSESINAFIQRFLSAQSQLDHFVEQVCDVADIVDFNDRVGLKQKMQRKAQKVCLKTGSPVESHAATVLTPYALSKLQDELVLAPQYASFLVDEGCFQVRHHTQTDGGCKVFWVPCQAHITCSCHLFEFSGTLCRHVLRVMSTNNCFHIPDQYLPTRWRGGGLSSVNQFRGVTTRDQPERMQFLESMVSTLIMESIETEERLDVACEQMSVALSRIKALPRPPAHGVNDITYSYSSDSLILPEVEDTDGIIHGFANPHDSIALGKLKERRARDVVDVTRKRRQFPGPLCGQYVHDPSDCSIMAGDNLGGDGLGYL 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01317 760 Pfam SWIM zinc finger 564 587 IPR007527 GO:0008270
Arst4g01317 760 Pfam MULE transposase domain 275 367 IPR018289 -
Arst4g01317 760 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 39 608 IPR031052 GO:0006355
Arst4g01317 760 ProSiteProfiles Zinc finger SWIM-type profile. 557 590 IPR007527 GO:0008270
Arst4g01317 760 SMART 26again6 565 592 IPR006564 GO:0008270
Arst4g01317 760 Pfam FAR1 DNA-binding domain 59 152 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01317 Arst-Chr4 14105192 14109361 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst4g01317 MULE 3e-21 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01317 - - vum:124836934 1345.87