Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01303 ATGAAAGAGCAAAAGCTAACTTCCAACCCTGCTACGACATTTGCACATTTGGATGCTACGACCGTACTATCAAGAGGATTGGCTGCCAAAGGTATCTATCCAGCTGTAGATCCTTTAGATTCAACGTCAACTATGCTCCAACCTCGGATTGTTGGTGAAGAACATTATGAAACTGCACAAAGAGCTTTGATCAATAACATTGCCAAAACTCATGGCGGTGTATCCGTATTTGGCGGAGTGGGGGAGCGTACTCGTGAGAGAAATGATATTTACATGGAAATGAAAGAATCTGGAGTAATTAATAAAAAAATTATTGGAGAATCAAAAGTTGCTCTAGTGTACGGTCAAATGAATGAACCGCCTAGAGCACGTATGAGAGTTGGTTTAACTGCCCTAAACATGGCGGAATATTTCAGAGATGTTAATGAACTAGACGTGCTTCTATTTATCGACAATATCTTCCGATTCGTCCAAGCGGGATCCGAAGTGTCAGCCTTATTGGGTCGAATGCCTTCCGCTGTAGGTTATCAACCGACCCTTAGTACCGAAATGGGTTCTTTACAAGAAAGAATTACTTCTACCAAAGAAGGGTCTATAACTTCTATTCAAGCAGTTTATGTACCCACAGATGATTTGACCGACCCTGCTCCTGCTACGACATTTGCACATTTGGATGCTACGACCGTACTATCAAGAGGATTGGCTGCCAAAGGTATCTATCCAGCTGTAGATCCTTTAGATTCAACGTCAACTATGCTCCAACCTCAGATTGTTGGTGAAGAACATTATGAAACTGCGCAAAGAGTTAAACAAACTTTACAGCATTACAAAGAACTTCAGGACATTATAGCTATCCTTGGGTTGGACGAATTATCCGAAGAGGATCGCTTAACTATAGCAAGAGCACGAAAAATTGAGCGTTTCTTATCACAGCCTTTTTTCGTAGCAGAAGTATTTACCGGTTCGCCAGGAAAATATGTAGGTCTAGCAGAAACAATTAGAGGGTTTAAATTGATTCTTTCTGGAGAATTAGACGGTCTTCCCGAGCAAGCCTTTTATTTGGTGGGTAATATCGATGAAGCAACTGCGAAGGCTACGAACTTAGAAATGGAGGGAAAATTGAAGAAATGA 1131 0.412 MKEQKLTSNPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRALINNIAKTHGGVSVFGGVGERTRERNDIYMEMKESGVINKKIIGESKVALVYGQMNEPPRARMRVGLTALNMAEYFRDVNELDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPTDDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQHYKELQDIIAILGLDELSEEDRLTIARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEATAKATNLEMEGKLKK 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01303 376 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 59 250 IPR000194 GO:0005524
Arst4g01303 376 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 253 368 - -
Arst4g01303 376 PANTHER ATP SYNTHASE 8 61 - -
Arst4g01303 376 CDD ATP-synt_F1_beta_C 257 364 - -
Arst4g01303 376 Gene3D - 253 376 IPR024034 -
Arst4g01303 376 NCBIfam F0F1 ATP synthase subunit beta 62 368 IPR005722 GO:0015986|GO:0045261|GO:0046933
Arst4g01303 376 ProSitePatterns ATP synthase alpha and beta subunits signature. 241 250 IPR020003 GO:0005524
Arst4g01303 376 ProSitePatterns ATP synthase alpha and beta subunits signature. 34 43 IPR020003 GO:0005524
Arst4g01303 376 Gene3D - 58 252 IPR027417 -
Arst4g01303 376 FunFam ATP synthase subunit beta 253 372 - -
Arst4g01303 376 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 47 IPR027417 -
Arst4g01303 376 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 255 IPR027417 -
Arst4g01303 376 Gene3D - 1 57 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01303 Arst-Chr4 13866787 13870306 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01303 76 314 Primary Pumps ATPases(2) AT1G78900 28.682 2.48e-20 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01303 K02112 - adu:127743769 581.637