Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01296 ATGATGATGGCGCAGCAACCAAGCTTAACGGGTCAACTTGTGGGTTCAGAGATACATGGCTTCCACACATTGCAAGACCTGGATGTTGAAAACACCATGGAGGAAGCAAAGAGCAGATGGCTTCGTCCCAATGAGATTCATGCTATACTCTCAAATTCCAAATATTTCACTATCCATGTCAAGCCAGTGAATAAGCCCAAAAGTGGTCGTATTATATTATTTGACCGCAAAATGCTTAGGAACTTCCGAAAAGATGGGTACAACTGGAAGAAGAAAAATGATGGGAAAACAGTTAAAGAAGCACATGAGCACTTAAAAGTTGGTAACGAAGAAAGGATACACGTATATTATGCACATGGCCAAGATAACCCAGGACTTGTTCGTAGATGTTATTGGTTGCTTGATAAGAGGCTGGAGCACATAGTCCTTGTTCATTACCGTGAAACACAAGAGTCACAAGTTTCTCCTGTCACACCTGTAAATTCTCATTCTAGTTCAGCCTCTGACCAACCATGGTTATCAGAAGAATTAGACTCAGGGACCAACACTGCTTATGCCAGTGGATTTAATGACAATTTGACGGTTGAGAGTCATGAAATGAAGCTTCATGAGCTTAATACACTTGAATGGGATGACCTCGTGCTTTCAAACGACAACACCTCTACAATAGTCACTAGTGGAAATGTTCAATCCTTTAATCAACAAAACCAAAGTTTTCTGAAAGGGAGCTCTGGCAATGTAGCAAGCAATTTGGTTCCAGAAATTCATTCTTTCAGTAAGTTAGCTCAGCCAATTGTTGAGAGCAATAGTGTTCCTTACAGTATTCCAGATAGTGTTGATTTTCAGAGGACTTCTCCTATCTCTTTAGCTGGTGTTGATTCCTCGAACACTTTGGTAAATCCAAGCTTGCAAAGTCAGGACAGCTTTGGAATGTGGATAAACAATATGATATCTGATTCGCCACCTTGTTCTGTTGAGTCAGCTCTTGAATCCTCAATTTCTTCGTCGGTTCAGGGGCAATATTCATCACTGGTGGCTGGTAATCAGCTATCTTCTCTGCCTGAACAAGTATTTACTATCACTGATGTGTCCCCGACATGGGCTTCTTCCACCGAGAAAACTAAGATCCTTGTAACTGGTTTATTTCATAATGACTATCAACACCTTGCAAAGTCCAATCTATATTGTGTCTGCAGTGATGCAAGTATTCCTGTAGAAACTGTTCAGCTTGGAGTCTACCGATGCTGGGTATCACCGCATTCTCCTGGATTTGTGAATCTCTACTTGAGCTTTGATGGCCGTAAACCAATTAGTCAAGTTGTTAACTTTGAGTATCGGACACCACTATTGCACGATCCTACTGCTTTTATGGAACAGAAATACGACTGGGAAGAATTTCGACTTCAAATTAGGCTTACTAATTTGCTTTTTGATACAAAAAAGAGCCTTGATATTTTCTCTAGTAAAGTGTCACCCAAGTCGCTGAAAGAGGCTAGGAAATTTGCCTTTAAAACATCTTTTATTTCTAAAAGCTGGCAATACCTGATGAAATCAACTGAGGAAAATACAATTCCATTTCCACAAGCAAAAGATGACTTGTTTCAAATTGCTTTGAAAAACAGATTAAAGGAATGGCTTTTGGAACGAATCAGCTTAGGTGTTAAGACTACTGAACATGATAAACAAGGGCAAGGAGTAATTCATTTGTGTGCAATTCTGGGATATACTTGGGCTGTTTCTTTATTTTCATGGTCCGGCTTGTCTCTTGATTTCCGTGACAAATTTGGATGGACAGCTCTACACTGGGCAGCATATTATGGAAGGGAGAAAATGGTTGGAACTCTTTTGTCTTTTGGGGCAAAGCCAAATTTGGTCACAGATCCAACTCCCCAAAATCCTGGTGGATGTACTGCTGCTGATCTTGCTTATATTAAGGGCTATGATGGGTTAGCGGCTTATCTTTCAGAAAAGTCTCTGGTCGAGCAAGTCAATGACATGAACCTAGCCGGAAATATCAGTGGCCCACTGGAAACCACCACAGTGGATATAGGAAACACTGAGAACCTTACCGAGGACCAACTCTATCTCAAGGAGACACTGGCATCTTACCGCACTGCAGCTGAGGCAGCAGCACGGATACAATCTGCATTTAGGGAGCACTCTCTAAAATTGCGATCTATGAAAATTGAATCTTTAAGTCCAGAGGATCAAGAACGCCAAATAGTGGCAGCAATGAAGATCCAGCATGCTTTCCGCAACTATGAGACAAGGAAAACGATGGCAGCCGCTGCTCGAATCCAATATAGATACCGTACATTTAAGTTGAGAAGAGAATTTCTCCACATGAAACGCCAGGTTATTAGAATTCAGGCTGCTTTCAGGGGATTTCAAGCCAGGAAGCAATATCGCAAAATTATTTGGTCTGTTGGAGTGCTTGAGAAAGTAATCCTGCGTTGGCGTTTGAAGAGAAAAGGTTTCCGTGGTCTCCAGGTCAATCATGACCAAGAAATGAAAGATGAGACACAGGGAAGCGACATAGAGGAGGACTTCTTTAGGACTAGTAGGAAACAAGCTGAAGAACGTGTTGAGAGGTCTGTCGTGCGTGTACAAGCCATGTTCCGTTCTAAGAAGGCACAAGAAGAGTACAGAAGGATGAAGCTGGCACATAATCAAGCACAGCTGGAGCTTGAATTTGAAGAACTACTGATTTGTGGAGATGACATGATAACGGAGAAGCAGTAA 2742 0.4165 MMMAQQPSLTGQLVGSEIHGFHTLQDLDVENTMEEAKSRWLRPNEIHAILSNSKYFTIHVKPVNKPKSGRIILFDRKMLRNFRKDGYNWKKKNDGKTVKEAHEHLKVGNEERIHVYYAHGQDNPGLVRRCYWLLDKRLEHIVLVHYRETQESQVSPVTPVNSHSSSASDQPWLSEELDSGTNTAYASGFNDNLTVESHEMKLHELNTLEWDDLVLSNDNTSTIVTSGNVQSFNQQNQSFLKGSSGNVASNLVPEIHSFSKLAQPIVESNSVPYSIPDSVDFQRTSPISLAGVDSSNTLVNPSLQSQDSFGMWINNMISDSPPCSVESALESSISSSVQGQYSSLVAGNQLSSLPEQVFTITDVSPTWASSTEKTKILVTGLFHNDYQHLAKSNLYCVCSDASIPVETVQLGVYRCWVSPHSPGFVNLYLSFDGRKPISQVVNFEYRTPLLHDPTAFMEQKYDWEEFRLQIRLTNLLFDTKKSLDIFSSKVSPKSLKEARKFAFKTSFISKSWQYLMKSTEENTIPFPQAKDDLFQIALKNRLKEWLLERISLGVKTTEHDKQGQGVIHLCAILGYTWAVSLFSWSGLSLDFRDKFGWTALHWAAYYGREKMVGTLLSFGAKPNLVTDPTPQNPGGCTAADLAYIKGYDGLAAYLSEKSLVEQVNDMNLAGNISGPLETTTVDIGNTENLTEDQLYLKETLASYRTAAEAAARIQSAFREHSLKLRSMKIESLSPEDQERQIVAAMKIQHAFRNYETRKTMAAAARIQYRYRTFKLRREFLHMKRQVIRIQAAFRGFQARKQYRKIIWSVGVLEKVILRWRLKRKGFRGLQVNHDQEMKDETQGSDIEEDFFRTSRKQAEERVERSVVRVQAMFRSKKAQEEYRRMKLAHNQAQLELEFEELLICGDDMITEKQ 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01296 913 ProSiteProfiles IQ motif profile. 863 891 IPR000048 GO:0005515
Arst4g01296 913 SMART iq_5 861 883 IPR000048 GO:0005515
Arst4g01296 913 SMART iq_5 739 761 IPR000048 GO:0005515
Arst4g01296 913 SMART iq_5 781 803 IPR000048 GO:0005515
Arst4g01296 913 ProSiteProfiles IQ motif profile. 759 786 IPR000048 GO:0005515
Arst4g01296 913 SMART CG_1_2 33 150 IPR005559 GO:0003677
Arst4g01296 913 Gene3D - 758 806 - -
Arst4g01296 913 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 28 893 - -
Arst4g01296 913 ProSiteProfiles CG-1 DNA-binding domain profile. 29 155 IPR005559 GO:0003677
Arst4g01296 913 MobiDBLite consensus disorder prediction 152 175 - -
Arst4g01296 913 FunFam Calmodulin-binding transcription activator 5 354 450 - -
Arst4g01296 913 ProSiteProfiles Ankyrin repeat region circular profile. 595 623 - -
Arst4g01296 913 SMART ANK_2a 595 624 IPR002110 GO:0005515
Arst4g01296 913 SMART ANK_2a 634 665 IPR002110 GO:0005515
Arst4g01296 913 Coils Coil 875 895 - -
Arst4g01296 913 Gene3D Immunoglobulins 354 448 IPR013783 -
Arst4g01296 913 ProSiteProfiles IQ motif profile. 782 806 IPR000048 GO:0005515
Arst4g01296 913 Pfam Ankyrin repeats (3 copies) 540 624 IPR002110 GO:0005515
Arst4g01296 913 SUPERFAMILY E set domains 359 446 IPR014756 -
Arst4g01296 913 ProSiteProfiles Ankyrin repeat profile. 595 627 IPR002110 GO:0005515
Arst4g01296 913 SUPERFAMILY Ankyrin repeat 533 657 IPR036770 -
Arst4g01296 913 Pfam CG-1 domain 35 148 IPR005559 GO:0003677
Arst4g01296 913 Pfam IQ calmodulin-binding motif 786 803 IPR000048 GO:0005515
Arst4g01296 913 FunFam calmodulin-binding transcription activator 5 525 665 - -
Arst4g01296 913 Gene3D - 526 667 IPR036770 -
Arst4g01296 913 ProSiteProfiles IQ motif profile. 740 769 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01296 Arst-Chr4 13669548 13676757 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01296 33 895 CAMTA Transcription Factor Family AT3G16940 55.505 0.0 926
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Arst4g01296 Ank_2 1.2e-06 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01296 K21596 - gmx:100819198 1320.45