Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01295 ATGATGATGGCGCAGCAACCAAGCTTAACGGGTCAACTTGTGGGTTCAGAGATACATGGCTTCCACACATTGCAAGACCTGGATGTTGAAAACACCATGGAGGAAGCAAAGAGCAGATGGCTTCGTCCCAATGAGATTCATGCTATACTCTCAAATTCCAAATATTTCACTATCCATGTCAAGCCAGTGAATAAGCCCAAAAGTGGTCGTATTATATTATTTGACCGCAAAATGCTTAGGAACTTCCGAAAAGATGGGTACAACTGGAAGAAGAAAAATGATGGGAAAACAGTTAAAGAAGCACATGAGCACTTAAAAGTTGGTAACGAAGAAAGGATACACGTATATTATGCACATGGCCAAGATAACCCAGGACTTGTTCGTAGATGTTATTGGTTGCTTGATAAGAGGCTGGAGCACATAGTCCTTGTTCATTACCGTGAAACACAAGAGTCACAAGTTTCTCCTGTCACACCTGTAAATTCTCATTCTAGTTCAGCCTCTGACCAACCATGGTTATCAGAAGAATTAGACTCAGGGACCAACACTGCTTATGCCAGTGGATTTAATGACAATTTGACGGTTGAGAGTCATGAAATGAAGCTTCATGAGCTTAATACACTTGAATGGGATGACCTCGTGCTTTCAAACGACAACACCTCTACAATAGTCACTAGTGGAAATGTTCAATCCTTTAATCAACAAAACCAAAGTTTTCTGAAAGGGAGCTCTGGCAATGTAGCAAGCAATTTGGTTCCAGAAATTCATTCTTTCACTGGTGTTGATTCCTCGAACACTTTGGTAAATCCAAGCTTGCAAAGTCAGGACAGCTTTGGAATGTGGATAAACAATATGATATCTGATTCGCCACCTTGTTCTGTTGAGTCAGCTCTTGAATCCTCAATTTCTTCGTCGGTTCAGGGGCAATATTCATCACTGGTGGCTGGTAATCAGCTATCTTCTCTGCCTGAACAAGTATTTACTATCACTGATGTGTCCCCGACATGGGCTTCTTCCACCGAGAAAACTAAGATCCTTGTAACTGGTTTATTTCATAATGACTATCAACACCTTGCAAAGTCCAATCTATATTGTGTCTGCAGTGATGCAAGTATTCCTGTAGAAACTGTTCAGCTTGGAGTCTACCGATGCTGGGTATCACCGCATTCTCCTGGATTTGTGAATCTCTACTTGAGCTTTGATGGCCGTAAACCAATTAGTCAAGTTGTTAACTTTGAGTATCGGACACCACTATTGCACGATCCTACTGCTTTTATGGAACAGAAATACGACTGGGAAGAATTTCGACTTCAAATTAGGCTTACTAATTTGCTTTTTGATACAAAAAAGAGCCTTGATATTTTCTCTAGTAAAGTGTCACCCAAGTCGCTGAAAGAGGCTAGGAAATTTGCCTTTAAAACATCTTTTATTTCTAAAAGCTGGCAATACCTGATGAAATCAACTGAGGAAAATACAATTCCATTTCCACAAGCAAAAGATGACTTGTTTCAAATTGCTTTGAAAAACAGATTAAAGGAATGGCTTTTGGAACGAATCAGCTTAGGTGTTAAGACTACTGAACATGATAAACAAGGGCAAGGAGTAATTCATTTGTGTGCAATTCTGGGATATACTTGGGCTGTTTCTTTATTTTCATGGTCCGGCTTGTCTCTTGATTTCCGTGACAAATTTGGATGGACAGCTCTACACTGGGCAGCATATTATGGAAGGGAGAAAATGGTTGGAACTCTTTTGTCTTTTGGGGCAAAGCCAAATTTGGTCACAGATCCAACTCCCCAAAATCCTGGTGGATGTACTGCTGCTGATCTTGCTTATATTAAGGGCTATGATGGGTTAGCGGCTTATCTTTCAGAAAAGTCTCTGGTCGAGCAAGTCAATGACATGAACCTAGCCGGAAATATCAGTGGCCCACTGGAAACCACCACAGTGGATATAGGAAACACTGAGAACCTTACCGAGGACCAACTCTATCTCAAGGAGACACTGGCATCTTACCGCACTGCAGCTGAGGCAGCAGCACGGATACAATCTGCATTTAGGGAGCACTCTCTAAAATTGCGATCTATGAAAATTGAATCTTTAAGTCCAGAGGATCAAGAACGCCAAATAGTGGCAGCAATGAAGATCCAGCATGCTTTCCGCAACTATGAGACAAGGAAAACGATGGCAGCCGCTGCTCGAATCCAATATAGATACCGTACATTTAAGTTGAGAAGAGAATTTCTCCACATGAAACGCCAGGTTATTAGAATTCAGGCTGCTTTCAGGGGATTTCAAGCCAGGAAGCAATATCGCAAAATTATTTGGTCTGTTGGAGTGCTTGAGAAAGTAATCCTGCGTTGGCGTTTGAAGAGAAAAGGTTTCCGTGGTCTCCAGGTCAATCATGACCAAGAAATGAAAGATGAGACACAGGGAAGCGACATAGAGGAGGACTTCTTTAGGACTAGTAGGAAACAAGCTGAAGAACGTGTTGAGAGGTCTGTCGTGCGTGTACAAGCCATGTTCCGTTCTAAGAAGGCACAAGAAGAGTACAGAAGGATGAAGCTGGCACATAATCAAGCACAGCTGGAGCTTGAATTTGAAGAACTACTGATTTGTGGAGATGACATGATAACGGAGAAGCAGTAA 2649 0.4175 MMMAQQPSLTGQLVGSEIHGFHTLQDLDVENTMEEAKSRWLRPNEIHAILSNSKYFTIHVKPVNKPKSGRIILFDRKMLRNFRKDGYNWKKKNDGKTVKEAHEHLKVGNEERIHVYYAHGQDNPGLVRRCYWLLDKRLEHIVLVHYRETQESQVSPVTPVNSHSSSASDQPWLSEELDSGTNTAYASGFNDNLTVESHEMKLHELNTLEWDDLVLSNDNTSTIVTSGNVQSFNQQNQSFLKGSSGNVASNLVPEIHSFTGVDSSNTLVNPSLQSQDSFGMWINNMISDSPPCSVESALESSISSSVQGQYSSLVAGNQLSSLPEQVFTITDVSPTWASSTEKTKILVTGLFHNDYQHLAKSNLYCVCSDASIPVETVQLGVYRCWVSPHSPGFVNLYLSFDGRKPISQVVNFEYRTPLLHDPTAFMEQKYDWEEFRLQIRLTNLLFDTKKSLDIFSSKVSPKSLKEARKFAFKTSFISKSWQYLMKSTEENTIPFPQAKDDLFQIALKNRLKEWLLERISLGVKTTEHDKQGQGVIHLCAILGYTWAVSLFSWSGLSLDFRDKFGWTALHWAAYYGREKMVGTLLSFGAKPNLVTDPTPQNPGGCTAADLAYIKGYDGLAAYLSEKSLVEQVNDMNLAGNISGPLETTTVDIGNTENLTEDQLYLKETLASYRTAAEAAARIQSAFREHSLKLRSMKIESLSPEDQERQIVAAMKIQHAFRNYETRKTMAAAARIQYRYRTFKLRREFLHMKRQVIRIQAAFRGFQARKQYRKIIWSVGVLEKVILRWRLKRKGFRGLQVNHDQEMKDETQGSDIEEDFFRTSRKQAEERVERSVVRVQAMFRSKKAQEEYRRMKLAHNQAQLELEFEELLICGDDMITEKQ 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01295 882 Gene3D - 495 636 IPR036770 -
Arst4g01295 882 Gene3D Immunoglobulins 323 417 IPR013783 -
Arst4g01295 882 FunFam calmodulin-binding transcription activator 5 494 634 - -
Arst4g01295 882 FunFam Calmodulin-binding transcription activator 5 323 419 - -
Arst4g01295 882 Pfam Ankyrin repeats (3 copies) 509 593 IPR002110 GO:0005515
Arst4g01295 882 Gene3D - 727 775 - -
Arst4g01295 882 SMART CG_1_2 33 150 IPR005559 GO:0003677
Arst4g01295 882 ProSiteProfiles Ankyrin repeat region circular profile. 564 592 - -
Arst4g01295 882 Coils Coil 844 864 - -
Arst4g01295 882 ProSiteProfiles CG-1 DNA-binding domain profile. 29 155 IPR005559 GO:0003677
Arst4g01295 882 SUPERFAMILY Ankyrin repeat 502 626 IPR036770 -
Arst4g01295 882 MobiDBLite consensus disorder prediction 152 175 - -
Arst4g01295 882 SUPERFAMILY E set domains 328 415 IPR014756 -
Arst4g01295 882 ProSiteProfiles Ankyrin repeat profile. 564 596 IPR002110 GO:0005515
Arst4g01295 882 Pfam IQ calmodulin-binding motif 755 772 IPR000048 GO:0005515
Arst4g01295 882 ProSiteProfiles IQ motif profile. 709 738 IPR000048 GO:0005515
Arst4g01295 882 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 28 862 - -
Arst4g01295 882 Pfam CG-1 domain 35 148 IPR005559 GO:0003677
Arst4g01295 882 SMART ANK_2a 603 634 IPR002110 GO:0005515
Arst4g01295 882 SMART ANK_2a 564 593 IPR002110 GO:0005515
Arst4g01295 882 SMART iq_5 708 730 IPR000048 GO:0005515
Arst4g01295 882 SMART iq_5 750 772 IPR000048 GO:0005515
Arst4g01295 882 SMART iq_5 830 852 IPR000048 GO:0005515
Arst4g01295 882 ProSiteProfiles IQ motif profile. 832 860 IPR000048 GO:0005515
Arst4g01295 882 ProSiteProfiles IQ motif profile. 728 755 IPR000048 GO:0005515
Arst4g01295 882 ProSiteProfiles IQ motif profile. 751 775 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01295 Arst-Chr4 13669548 13676757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01295 33 864 CAMTA Transcription Factor Family AT3G16940 57.738 0.0 939
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Arst4g01295 Ank_2 1.2e-06 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01295 K21596 - gmx:100819198 1273.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g01295 4 13669548 13676757 Arst4g01295 4 13669548 13676757 ECH
Arst1g03339 1 94502558 94509294 Arst4g01295 4 13669548 13676757 PCT