Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01256 ATGGAGTCAACTACCCCCTTCTTCTCCATCATCACGACCCTTATCTTCTACTCCTTAGTCTCACTCTCAGCTTCTTCAAATCCAAACAATCCATTCCCAAAAGAAGCTCTTCCTACTAAATCTGGTTACCTCCCAGTAAGTACATCATCTTCCTCTGCTATCTTCTATGCTTTCTATGAAGCTCATAACTCAACTTTACCTCTCTCCCAAACCCCTCTTCTCATTTGGCTCCAAGGTGGTCCCGGATGCTCCTCCATGATTGGCAACTTCTATGAGCTTGGACCATGGACTCTCACTGATGAATCACCCCTTACACTTCACCCTAACCCTGGTGCTTGGAACAGGATCTTTGGTCTCCTCTTTCTTGATAACCCCATTGGTTCTGGATTCAGTGTAGCAGCAACAACACAAGAAATCCCAACTGATCAAGATGGTGTTGCAAAGCATCTCTTTGCTGCTATAACAAGGTTTGTTGAGCTTGATCCTGTTTTCAAGAACCGTCCTATTTATATTACTGGTGAAAGTTATGCTGGGAAGTATGTTCCTGCTATTGGATACTATATATTAAAGGAGAATTCGCGGCTGCGCGGTTCTAAGAGAGTGAATTTGGCTGGTTTGGCTATTGGAGATGGGTTGACTGACCCTGTTACACAAGTGGTTACTCATGCTGTTAATGCTTATTATATTGGTTTGATCAATGAGAGGCAGAGGAATGAGTTGGAGAAGGATCAATTGGAAGCGGTTAGGTTAGCGCAGATTGGGAATTGGAGCGCTGCAACTGATGCAAGGAATGTGGTTTTGCGAAAGTTGAGGAATGTAACAGGGTTGGCTACTTTGTTTGATTACACAAGGAAAAAGCCCTATGGCGATGATGTAGTGGATAAATTCTTGAACAATGTGGAAGCTAAGAAGGCCTTAGGGGTGAAGAATGAGTCACTTGTGTTTGAAGGATGCAGCGATGTGGTTGGCGCCGTGTTACATGCTGATGTGATGAAGAGTGTGAAGTACATGGTAGAGGAATTGGTGAGGAACACTAGGGTGTTGTTATATCAAGGTCAGCATGATATTCAGGATGGAGTGGTTCAGGTCGAGGCGTGGGTGAAGACGATGAAGTGGGAAGGGATTGAGGATTTTTTGAATGCAGAGAGGAAGATATGGAAGGTGAACGGAGAGCTTGCTGGCTATGTCCAACAATGGAAGTCACTCACTAATGTTGTGGTGTTAGGGGCAGGGCATCTTTTACCTTCTGATCAACCTGTGACATCTCAAGCAATGATTGAAGATTGGGTCCTTGAAAAAGGTTTATTTCAAAGTTTGCAGCATCATGAAAATGTGTCAAGAAATTCATTGTGA 1353 0.4375 MESTTPFFSIITTLIFYSLVSLSASSNPNNPFPKEALPTKSGYLPVSTSSSSAIFYAFYEAHNSTLPLSQTPLLIWLQGGPGCSSMIGNFYELGPWTLTDESPLTLHPNPGAWNRIFGLLFLDNPIGSGFSVAATTQEIPTDQDGVAKHLFAAITRFVELDPVFKNRPIYITGESYAGKYVPAIGYYILKENSRLRGSKRVNLAGLAIGDGLTDPVTQVVTHAVNAYYIGLINERQRNELEKDQLEAVRLAQIGNWSAATDARNVVLRKLRNVTGLATLFDYTRKKPYGDDVVDKFLNNVEAKKALGVKNESLVFEGCSDVVGAVLHADVMKSVKYMVEELVRNTRVLLYQGQHDIQDGVVQVEAWVKTMKWEGIEDFLNAERKIWKVNGELAGYVQQWKSLTNVVVLGAGHLLPSDQPVTSQAMIEDWVLEKGLFQSLQHHENVSRNSL 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01256 450 ProSitePatterns Serine carboxypeptidases, serine active site. 171 178 IPR018202 GO:0004185
Arst4g01256 450 Gene3D alpha/beta hydrolase 18 441 IPR029058 -
Arst4g01256 450 FunFam Carboxypeptidase 23 437 - -
Arst4g01256 450 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 40 419 IPR001563 GO:0004185|GO:0006508
Arst4g01256 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 132 IPR001563 GO:0004185|GO:0006508
Arst4g01256 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 402 415 IPR001563 GO:0004185|GO:0006508
Arst4g01256 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 182 IPR001563 GO:0004185|GO:0006508
Arst4g01256 450 PRINTS Carboxypeptidase C serine protease (S10) family signature 109 121 IPR001563 GO:0004185|GO:0006508
Arst4g01256 450 SUPERFAMILY alpha/beta-Hydrolases 38 431 IPR029058 -
Arst4g01256 450 Pfam Serine carboxypeptidase 36 430 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01256 Arst-Chr4 12658419 12660119 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01256 292 430 Calmodulin-binding Proteins AT2G22960 23.239 5.69e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01256 K09645 - gmx:102663282 681.019