Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01246 ATGGGAACTTCAGAAGCAAAAGAAGAAGAGCTTGTGAAGAAGATAGAGAAGCTTGAAGCTGGCCATGTTCAGCTGAAGCATGAGATGTCGAAGCTGAAGCTATCTGAACGCCGCCATCATCACCGCCACAGGTCGCACTCCTTGTCGCCGCAGCGTTCGAGGCTTGGCGGTTGTGGCGGTGGCGGGGGTGCTGCTGCTGGTTGTAACAACAAAGGGTCTTCTTCTTCACCCTTGAAGAGGGAGAGTCGCAACAGCAATAATCATAATCATAATCACAATCAGAACCAGAATCAGAATGAAGATGGTGATGGTGATTGTGATGGTGATGGTGATGGTGATGTTGTTGGTGTGAATGTTGGCCTTAGTGAGAAGCAGTATATGAACATTTTGCAGTCAATGGGGCACTCGCTTCATATTCTGGATCTTCAATGCCGGATTATATATTGGAATCCTAGTGCCGAAAATCTGTATGGTTATGCAGCAGTAGAGGCTCTTGGAAAAGATGGGATTGAGCTGCTCGTAGACCCTATTGATTTCGGCTTAGCATATGATGTTTTCAACCATGTCACTGTGGGGGAGAGTTGGAGCGGCCAGTTCCCTGCCAAGAACAAGATGGGGGAGAAATTTTCAGTTGTGGCAACCAACACACCATTCTATGATGACGATAGGAAGTTGATTGGGGTTATCTGTGTGTCCATTGATTCTAGACCCTTTCTTGAAACTCGAGCTACTTTATCAGATGTGAAGAATGCTGCACCAGGTTCAGACTTGGATTATAACCACGCGAAGAGTGGCATTTCAAATAAACTTGGCCTTGACTCTCAGCAGCCACTTCAAGTTGCTCTAGCATCCAAAATTTCTAATTTGAAAGAGGATGGTAATTCCAGTGGAGCTAGCACTCCCAGAGGTGATGTACCACCTCCATTCGGTGTATTTTGTCATGTTGAAGAGAAATCACCAGCTAAATCTTTGAGAGACTCTGGTGACGATGGCGAAGGAAAACCAATTCACAAGATCATAACTTCTAAAGCTGAAGCATGGATTCAAAAGAGAACATTGTCATGGCCATGGAGAGGAAATGGTCAAGCTGGATCCGAGGCAAGAAATGTTCCTGTTGCTAGGCCACTGGTGCAGAATGATCAAGAACATGAACTGGTTAATCAGATGAATCTTTCTTCCGAGTCCAAGATGGAAGTCCAGGCAGGTAATCGGCCTGTTAATAATGAGGCTTCAGGATCGTGGTCCTCAGTTAACGTTAACAGTACTAGCAGTACCAGCAGCTGCGGCAGTGGCAGCAGTGGTGCTGTCAATAATAAAGTGGATATTGATACCGATTGCTTGGATTATGAAATCTTGTGGGAGGACCTCACAATTGGAGAACAAATTGGGCAAGGTTCTTGTGGAACTGTATATCATGCCCTGTGGTATGGATCAGATGTTGCGGTCAAAGTATTCTCAAAGCAAGAATATTCAGAGGATGTGATACTATCCTTCAGACAAGAGGTGTCTGTCTTGAAAAGACTTCGCCATCCAAATATTATTCTCTTCATGGGGGCAGTGACTTCACCTCAACGTCTCTGCATTGTGACAGAGTTTCTCCCACGTGGAAGCTTGTTTCGTTTGCTCCAAAGAAATACATCCAAACTTGACTGGAGACGGCGAGTTCATATGGCTTTAGATATCGCACGTGGTGTGAATTATCTTCATCGTTGCAGCCCCCCTATTGTTCATCGAGATTTGAAGTCTTCAAATCTCCTAGTTGACAAGAATTGGACTGTGAAGGTTGGTGATTTTGGTCTTTCACGCCTTAAGCATGAAACATATCTCACAACCAAAACAGGAAAGGGCACGGTATGCTTTCAATATTTATTTATTTTTCGGGGCCATAAGATCTTTGGTTTGTTTAGAATACTTCCCTTTAAAACTTGTTAG 1932 0.4436 MGTSEAKEEELVKKIEKLEAGHVQLKHEMSKLKLSERRHHHRHRSHSLSPQRSRLGGCGGGGGAAAGCNNKGSSSSPLKRESRNSNNHNHNHNQNQNQNEDGDGDCDGDGDGDVVGVNVGLSEKQYMNILQSMGHSLHILDLQCRIIYWNPSAENLYGYAAVEALGKDGIELLVDPIDFGLAYDVFNHVTVGESWSGQFPAKNKMGEKFSVVATNTPFYDDDRKLIGVICVSIDSRPFLETRATLSDVKNAAPGSDLDYNHAKSGISNKLGLDSQQPLQVALASKISNLKEDGNSSGASTPRGDVPPPFGVFCHVEEKSPAKSLRDSGDDGEGKPIHKIITSKAEAWIQKRTLSWPWRGNGQAGSEARNVPVARPLVQNDQEHELVNQMNLSSESKMEVQAGNRPVNNEASGSWSSVNVNSTSSTSSCGSGSSGAVNNKVDIDTDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSEDVILSFRQEVSVLKRLRHPNIILFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTSKLDWRRRVHMALDIARGVNYLHRCSPPIVHRDLKSSNLLVDKNWTVKVGDFGLSRLKHETYLTTKTGKGTVCFQYLFIFRGHKIFGLFRILPFKTC 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01246 643 SUPERFAMILY PYP-like sensor domain (PAS domain) 122 234 IPR035965 -
Arst4g01246 643 CDD PAS 139 234 IPR000014 -
Arst4g01246 643 ProSiteProfiles Protein kinase domain profile. 456 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g01246 643 MobiDBLite consensus disorder prediction 396 434 - -
Arst4g01246 643 Pfam Protein tyrosine and serine/threonine kinase 456 621 IPR001245 GO:0004672|GO:0006468
Arst4g01246 643 Pfam PAS domain 139 234 IPR000014 -
Arst4g01246 643 SMART pas_2 124 191 IPR000014 -
Arst4g01246 643 CDD STKc_MAP3K-like 462 620 - -
Arst4g01246 643 Gene3D Transferase(Phosphotransferase) domain 1 534 631 - -
Arst4g01246 643 Gene3D PAS domain 135 236 - -
Arst4g01246 643 MobiDBLite consensus disorder prediction 29 110 - -
Arst4g01246 643 FunFam PAS domain-containing protein tyrosine kinase 449 533 - -
Arst4g01246 643 MobiDBLite consensus disorder prediction 68 101 - -
Arst4g01246 643 ProSiteProfiles PAS repeat profile. 122 193 IPR000014 -
Arst4g01246 643 NCBIfam PAS domain S-box protein 122 234 IPR000014 -
Arst4g01246 643 Gene3D Phosphorylase Kinase; domain 1 449 533 - -
Arst4g01246 643 Coils Coil 8 35 - -
Arst4g01246 643 MobiDBLite consensus disorder prediction 33 49 - -
Arst4g01246 643 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 102 619 - -
Arst4g01246 643 MobiDBLite consensus disorder prediction 289 310 - -
Arst4g01246 643 SUPERFAMILY Protein kinase-like (PK-like) 447 620 IPR011009 -
Arst4g01246 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 575 587 IPR008271 GO:0004672|GO:0006468
Arst4g01246 643 SMART serkin_6 456 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01246 Arst-Chr4 12369905 12374476 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01246 9 617 MAP Kinase Kinase Kinase AT3G06620 50.888 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Arst4g01246 PK_Tyr_Ser-Thr 1.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01246 - - gmx:100800867 776.163