Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01244 ATGGGAACTTCAGAAGCAAAAGAAGAAGAGCTTGTGAAGAAGATAGAGAAGCTTGAAGCTGGCCATGTTCAGCTGAAGCATGAGATGTCGAAGCTGAAGCTATCTGAACGCCGCCATCATCACCGCCACAGGTCGCACTCCTTGTCGCCGCAGCGTTCGAGGCTTGGCGGTTGTGGCGGTGGCGGGGGTGCTGCTGCTGGTTGTAACAACAAAGGGTCTTCTTCTTCACCCTTGAAGAGGGAGAGTCGCAACAGCAATAATCATAATCATAATCACAATCAGAACCAGAATCAGAATGAAGATGGTGATGGTGATTGTGATGGTGATGGTGATGGTGATGTTGTTGGTGTGAATGTTGGCCTTAGTGAGAAGCAGTATATGAACATTTTGCAGTCAATGGGGCACTCGCTTCATATTCTGGATCTTCAATGCCGGATTATATATTGGAATCCTAGTGCCGAAAATCTGTATGGTTATGCAGCAGTAGAGGCTCTTGGAAAAGATGGGATTGAGCTGCTCGTAGACCCTATTGATTTCGGCTTAGCATATGATGTTTTCAACCATGTCACTGTGGGGGAGAGTTGGAGCGGCCAGTTCCCTGCCAAGAACAAGATGGGGGAGAAATTTTCAGTTGTGGCAACCAACACACCATTCTATGATGACGATAGGAAGTTGATTGGGGTTATCTGTGTGTCCATTGATTCTAGACCCTTTCTTGAAACTCGAGCTACTTTATCAGATGTGAAGAATGCTGCACCAGGTTCAGACTTGGATTATAACCACGCGAAGAGTGGCATTTCAAATAAACTTGGCCTTGACTCTCAGCAGCCACTTCAAGTTGCTCTAGCATCCAAAATTTCTAATTTGGCATCAAAGGTGAGTAATAAAGTTAAGTCAAGAATGCGGACAGGAGAAAATGGTGTTGACCGTTATGGTTGGAGCGGAGAAAGTCATCATTCTGATCAGAGTTTTTCGGATTGTGTTTTTTCTGACCAGAAAGAGGATGGTAATTCCAGTGGAGCTAGCACTCCCAGAGGTGATGTACCACCTCCATTCGGTGTATTTTGTCATGTTGAAGAGAAATCACCAGCTAAATCTTTGAGAGACTCTGGTGACGATGGCGAAGGAAAACCAATTCACAAGATCATAACTTCTAAAGCTGAAGCATGGATTCAAAAGAGAACATTGTCATGGCCATGGAGAGGAAATGGTCAAGCTGGATCCGAGGCAAGAAATGTTCCTGTTGCTAGGCCACTGGTGCAGAATGATCAAGAACATGAACTGGTTAATCAGATGAATCTTTCTTCCGAGTCCAAGATGGAAGTCCAGGCAGGTAATCGGCCTGTTAATAATGAGGCTTCAGGATCGTGGTCCTCAGTTAACGTTAACAGTACTAGCAGTACCAGCAGCTGCGGCAGTGGCAGCAGTGGTGCTGTCAATAATAAAGTGGATATTGATACCGATTGCTTGGATTATGAAATCTTGTGGGAGGACCTCACAATTGGAGAACAAATTGGGCAAGGTTCTTGTGGAACTGTATATCATGCCCTGTGGTATGGATCAGATGTTGCGGTCAAAGTATTCTCAAAGCAAGAATATTCAGAGGATGTGATACTATCCTTCAGACAAGAGGTGTCTGTCTTGAAAAGACTTCGCCATCCAAATATTATTCTCTTCATGGGGGCAGTGACTTCACCTCAACGTCTCTGCATTGTGACAGAGTTTCTCCCACGTGGAAGCTTGTTTCGTTTGCTCCAAAGAAATACATCCAAACTTGACTGGAGACGGCGAGTTCATATGGCTTTAGATATCGCACGTGGTGTGAATTATCTTCATCGTTGCAGCCCCCCTATTGTTCATCGAGATTTGAAGTCTTCAAATCTCCTAGTTGACAAGAATTGGACTGTGAAGGTTGGTGATTTTGGTCTTTCACGCCTTAAGCATGAAACATATCTCACAACCAAAACAGGAAAGGGCACGGTATGCTTTCAATATTTATTTATTTTTCGGGGCCATAAGATCTTTGGTTTGTCCGATGTGTACAGCTTTGGGGTGATATTGTGGGAACTTGCAACTGAAAAGATCCCGTGGGATACTCTCAATGCAATGCAGGTTATTGGGGCTGTAGGGTTTATGAACCATCGGTTAGAAATTCCGGCAGATGTTGATCCGCAGTGGGCTTCTATAATGGAGAGCTGCTGGCATAGCGATCCGGCTCAGCGACCAACATTCCAGGAACTTGTGGAAAGGCTCAGAGAAATGCAGAGACGACATGCCATTCAGCTCCAGGCGGCTCGTTCTGCCAGCGGTGGAAGCAATCAGAAGGAATCTTAA 2334 0.4516 MGTSEAKEEELVKKIEKLEAGHVQLKHEMSKLKLSERRHHHRHRSHSLSPQRSRLGGCGGGGGAAAGCNNKGSSSSPLKRESRNSNNHNHNHNQNQNQNEDGDGDCDGDGDGDVVGVNVGLSEKQYMNILQSMGHSLHILDLQCRIIYWNPSAENLYGYAAVEALGKDGIELLVDPIDFGLAYDVFNHVTVGESWSGQFPAKNKMGEKFSVVATNTPFYDDDRKLIGVICVSIDSRPFLETRATLSDVKNAAPGSDLDYNHAKSGISNKLGLDSQQPLQVALASKISNLASKVSNKVKSRMRTGENGVDRYGWSGESHHSDQSFSDCVFSDQKEDGNSSGASTPRGDVPPPFGVFCHVEEKSPAKSLRDSGDDGEGKPIHKIITSKAEAWIQKRTLSWPWRGNGQAGSEARNVPVARPLVQNDQEHELVNQMNLSSESKMEVQAGNRPVNNEASGSWSSVNVNSTSSTSSCGSGSSGAVNNKVDIDTDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSEDVILSFRQEVSVLKRLRHPNIILFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTSKLDWRRRVHMALDIARGVNYLHRCSPPIVHRDLKSSNLLVDKNWTVKVGDFGLSRLKHETYLTTKTGKGTVCFQYLFIFRGHKIFGLSDVYSFGVILWELATEKIPWDTLNAMQVIGAVGFMNHRLEIPADVDPQWASIMESCWHSDPAQRPTFQELVERLREMQRRHAIQLQAARSASGGSNQKES 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01244 777 FunFam PAS domain-containing protein tyrosine kinase family protein 577 768 - -
Arst4g01244 777 FunFam PAS domain-containing protein tyrosine kinase 492 576 - -
Arst4g01244 777 Gene3D Phosphorylase Kinase; domain 1 492 576 - -
Arst4g01244 777 CDD PAS 139 234 IPR000014 -
Arst4g01244 777 Pfam PAS domain 139 234 IPR000014 -
Arst4g01244 777 MobiDBLite consensus disorder prediction 295 350 - -
Arst4g01244 777 SUPERFAMILY Protein kinase-like (PK-like) 488 751 IPR011009 -
Arst4g01244 777 SMART serkin_6 499 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g01244 777 MobiDBLite consensus disorder prediction 439 477 - -
Arst4g01244 777 Pfam Protein tyrosine and serine/threonine kinase 499 751 IPR001245 GO:0004672|GO:0006468
Arst4g01244 777 SMART pas_2 124 191 IPR000014 -
Arst4g01244 777 SUPERFAMILY PYP-like sensor domain (PAS domain) 122 234 IPR035965 -
Arst4g01244 777 MobiDBLite consensus disorder prediction 29 110 - -
Arst4g01244 777 MobiDBLite consensus disorder prediction 68 101 - -
Arst4g01244 777 Gene3D PAS domain 135 236 - -
Arst4g01244 777 ProSiteProfiles PAS repeat profile. 122 193 IPR000014 -
Arst4g01244 777 NCBIfam PAS domain S-box protein 122 234 IPR000014 -
Arst4g01244 777 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Arst4g01244 777 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 114 756 - -
Arst4g01244 777 Coils Coil 8 35 - -
Arst4g01244 777 MobiDBLite consensus disorder prediction 33 49 - -
Arst4g01244 777 Gene3D Transferase(Phosphotransferase) domain 1 577 777 - -
Arst4g01244 777 MobiDBLite consensus disorder prediction 317 344 - -
Arst4g01244 777 CDD STKc_MAP3K-like 505 751 - -
Arst4g01244 777 ProSiteProfiles Protein kinase domain profile. 499 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g01244 777 PRINTS Tyrosine kinase catalytic domain signature 573 586 IPR001245 GO:0004672|GO:0006468
Arst4g01244 777 PRINTS Tyrosine kinase catalytic domain signature 722 744 IPR001245 GO:0004672|GO:0006468
Arst4g01244 777 PRINTS Tyrosine kinase catalytic domain signature 612 630 IPR001245 GO:0004672|GO:0006468
Arst4g01244 777 PRINTS Tyrosine kinase catalytic domain signature 678 700 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01244 Arst-Chr4 12367544 12374476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01244 9 768 MAP Kinase Kinase Kinase AT3G06620 54.974 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Arst4g01244 PK_Tyr_Ser-Thr 8.6e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01244 - - gmx:100800867 1004.59