Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01242 ATGGCTTCTTCTTTTCATGCTTCTTCAGCAATAATATCATCCATAATAGTGTCAATAATTATTCTCATTTGCATGCCATGTTCTGCTTTTGGCTTTATTAATGAGAAAGAGGTTATAGATGCTCCTTTGTTAACACAAAAGTTAGGAATTAATCGCACCATCAAAGTAGATATTAATGGCAATGGGGACTTCAAATCTGTTCAAGCTGCCATTGATTCCATTCCCGAAGGGAATTCCAATTGGGTCATTCTCCATGTTAGGAAAGGAGTATACAGAGAAAAGGTACACATACCAAAGACTAAGCGTTACATATTCATGAGAGGGAATGGAAAGGGAAGAACAGCCATAGTTTGGTCTCAAAGCTCCTCCGATAACATTGATTCTGCTACCTTCAAAGTTGAAGCCCGTGATTTCATTGCATTTGGAATTAGCTTCAAGAACGAAGCACCAACGGGTATTGCATATACCTCACAGAATCAATCGGTGGCAGCATTTGTGGCTGCAGACAAAATTGCATTTTACCATTGTGCATTTTTCAGTACTCATAACACTCTCTTTGATTACAAAGGCAGACACTACTATGAGTCTTGCTACATTCAAGGCTCAATTGATTTCATTTTTGGCCGTGGCAGATCCATCTTTGAGGGGTGTGAGATATTTGTAATTGATGACAAAAGGGTCACAATTCATGGGTCAATCACAGCACAAAACAGGGAGAGTGAACGAGAGATAAGTGGATTCATATTCAATAAATGCAGGGTTTATGGCATTGGTGGGGTGTACCTAGGAAGGGCTAAGGGTCCTTATTCTAGGACCATTTTTGCTCACTCTTATCTCTCCAAGACTGTTGTTCCTGAGGGTTGGACCAATTGGAGCTATGATGGTCCCACAAAGAATCTGTATCATGCTGAGTACAAGTGCTATGGACCAGGAGCCACAAGAGAGGGAAGAGCTTCATGGTCAAGACAACTTAGTGACCAAGAAGTTGCTTCATTTTTGTCTGTTGATTACATAGATGGCAAGAATTGGTTGCCAGCGTGGCACTAA 1047 0.4078 MASSFHASSAIISSIIVSIIILICMPCSAFGFINEKEVIDAPLLTQKLGINRTIKVDINGNGDFKSVQAAIDSIPEGNSNWVILHVRKGVYREKVHIPKTKRYIFMRGNGKGRTAIVWSQSSSDNIDSATFKVEARDFIAFGISFKNEAPTGIAYTSQNQSVAAFVAADKIAFYHCAFFSTHNTLFDYKGRHYYESCYIQGSIDFIFGRGRSIFEGCEIFVIDDKRVTIHGSITAQNRESEREISGFIFNKCRVYGIGGVYLGRAKGPYSRTIFAHSYLSKTVVPEGWTNWSYDGPTKNLYHAEYKCYGPGATREGRASWSRQLSDQEVASFLSVDYIDGKNWLPAWH 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01242 348 FunFam Pectinesterase 49 348 - -
Arst4g01242 348 Gene3D - 48 348 IPR012334 -
Arst4g01242 348 Pfam Pectinesterase 55 340 IPR000070 GO:0030599|GO:0042545
Arst4g01242 348 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 50 344 - -
Arst4g01242 348 SUPERFAMILY Pectin lyase-like 50 346 IPR011050 -
Arst4g01242 348 ProSitePatterns Pectinesterase signature 2. 199 208 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01242 Arst-Chr4 12320629 12322560 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01242 51 344 Carbohydrate Esterase AT5G47500 39.145 1.61e-72 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01242 - - gmx:100792967 563.918