Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01236 ATGAAACTCAATTCAGAGATGGGTTCACCATCTCTGATCCCAACAGCACTCACCTCTACCCCATCACGTGACTCGCACGTGCACAACCACAACAAGAAGAAAAAGCCTCATTCCAAGAACCACAAACAGAAGAACAACCGCCAAGTCAACAAATGGAAATCCCAAACACAACAAAACCTCTACTCCACCAAACTCCGGCAAGCCCTCGCCGGATCCACCCTATCGGGCGGCGGTAAGTCCATCCGCGAAACCGCCGACAGAGTTCTTGCCAGCGCCGCAAGAGGTAGAAGCCGGTGGAGCCGCGCCATACTCACGAACCGGCTCAAGCTGCGCTTCATGAAGAACAAGATAAAGAAGAAGAAGAAAAGAGTGGGGCCGATAGTCAAGTCGAGAAGAACAAGAACCCGGTTGAACGTGGTTCGATTGAAGGTAAAGACAGTTCCGGCGGTTCAGAAGAAAGTGAGGTTGTTGGGAAGGTTGGTTCCTGGTTGCAGGAAGGAACCTCTTCCGGTGATTCTAGAAGAAGCCATTGATTATATACCTGCTCTTGAGATGCAGGTTCGCGCCATGACTGCTCTCGCTAACTTGTTGTTAGCGAATTCTTCTTCTTCTTCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTATAAGTAA 696 0.4828 MKLNSEMGSPSLIPTALTSTPSRDSHVHNHNKKKKPHSKNHKQKNNRQVNKWKSQTQQNLYSTKLRQALAGSTLSGGGKSIRETADRVLASAARGRSRWSRAILTNRLKLRFMKNKIKKKKKRVGPIVKSRRTRTRLNVVRLKVKTVPAVQKKVRLLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMTALANLLLANSSSSSSPSSSSSSSSSSSSSSSSSSSSSSYK 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01236 231 MobiDBLite consensus disorder prediction 27 48 - -
Arst4g01236 231 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 54 201 IPR044660 GO:0006355
Arst4g01236 231 MobiDBLite consensus disorder prediction 200 231 - -
Arst4g01236 231 MobiDBLite consensus disorder prediction 1 57 - -
Arst4g01236 231 CDD bHLH_AtIBH1_like 148 194 IPR044549 GO:0006355
Arst4g01236 231 MobiDBLite consensus disorder prediction 1 24 - -
Arst4g01236 231 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 153 203 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01236 Arst-Chr4 12206322 12214760 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01236 49 193 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 47.853 1.11e-42 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01236 - - adu:107483409 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g01236 4 12206322 12214760 Arst4g01236 4 12206322 12214760 ECH
Arst1g03305 1 94229693 94230693 Arst4g01236 4 12206322 12214760 PCT