Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01211 ATGTTGCATTTCAAGAAGGGCGAGGCAGTGGAGGCCACCCACCCTAAAAACCCAGAGAACCGTAACCGTCTCTACCCTGCTTCCGTTCTCCGCGCCACCAACAATAACCGCCTCCTCCTCCAGTACCACACTCTCTTCTCCGACCACCCTCCCAACAACCCCCTCCGCTACTCCCTCCCCCTCTCTTGCGTCAGGCCCAAGCTTCCCGACCTCCTCAACCCCTGGTTCAAGGTTGGCGATCCCGTCGACGCATACTGCCACTCTCACGGCGGCGCTGCCTGGTGCTCCGCTACTGTCGACGATATCCTCGAGAACTCCAGGTATGCGGTGTCGTTTTGGGATGAGAAGGGGAATGTAAGCACGGAGCGTGCGGTTATTGAACAATGCAGGATGCGCCCTCACCGTGAATGGGTCCATGGATACTGGGTCCCACCTCTTCCGTCTCAAATGGATAACAATATCCAATATACATCAAGCAAGCCAAAGAAACTCAAAGCTGACGAAACCTATAAGCCACCTGAGATGGTGTCGATGACGAATACAGGAAATTTAAGATTTAAGATCAAATATAGCAGGAGACAATTAAAAGAGTCAAAGTTTAAAAAAGGCAGAATGGTGGAAGTCAGGGATGAGGATGAAGGTTACGAAGGTGCTTGGTTCGTTGCTACTATTGTTAGCTCAGTAGGAAAAGACATGTTTCTTGTAGAATATAGGGACCTCTTAGCAGATGATGGAACTCATCAGCTCTTGCAAGAAGTCGTCTATGAAAAATTCATAAGGCCCTGTCCACCTGAAGTTCCCTCTGTTAGCTCTTTCAAACAGTTTCAAGAGGTTGATGCATGGTATAATGATGCTTGGTGGGAAGGCGTGGTTCTTGCAGTGGTAAATAGCAGCGAGTATTTTGTTTCTTTCATGCACAACGATGTTTTGAGATTTGAAAGTTCCAAGCTAAGACCACACCAAGACTGGTTTGATGGAAAATGGGTCATGGCATCTAAGGGGTCAAGGGAACTGACAAAGAAGTTTGGAGATGTGATGTCAAAAGCCAAGAATCTCACTGGTAATAAAATAATATTGAAATGTCTGAAATCTCTCGAGCCAGAGCTGGAACAGATGCCAAGAATTCTAATGTCAGGGTCCAGGAACAGCAGCATTCAATTTGCATCGCATTTATATAAAGGTGCAAAGGTAGAAGTCAGGAGTGATGAAGAAGGTTACCAAGGTGCCTGGTACACTGCCATCATTGTTAACTCTTTACAGAACGGCAAGTATGTGGTGGAGTATCTCACCCTGAAAACTAACGACTTAACCGAACAACTGAGAGAGGAAGCAGATGCTTCAGATATCAGGCCAGTTCCACCAGACATTCAACATCGCCATCGCTATGTGCTGCGTGAATGGGTTGACGCTTGGTACAACGACGGATGGTGGAAAGGCCAGGTATGCGGTTTCGCTTGCTTCAGGTATAGTGTTTACTTTTGGCCTACAAAGGAGCAGCTGGAATTTGAACATTGTCATCTAAGGCCTCACCAAGAATGGATTGATGGAAGATGGGTACATGCTTGA 1566 0.4706 MLHFKKGEAVEATHPKNPENRNRLYPASVLRATNNNRLLLQYHTLFSDHPPNNPLRYSLPLSCVRPKLPDLLNPWFKVGDPVDAYCHSHGGAAWCSATVDDILENSRYAVSFWDEKGNVSTERAVIEQCRMRPHREWVHGYWVPPLPSQMDNNIQYTSSKPKKLKADETYKPPEMVSMTNTGNLRFKIKYSRRQLKESKFKKGRMVEVRDEDEGYEGAWFVATIVSSVGKDMFLVEYRDLLADDGTHQLLQEVVYEKFIRPCPPEVPSVSSFKQFQEVDAWYNDAWWEGVVLAVVNSSEYFVSFMHNDVLRFESSKLRPHQDWFDGKWVMASKGSRELTKKFGDVMSKAKNLTGNKIILKCLKSLEPELEQMPRILMSGSRNSSIQFASHLYKGAKVEVRSDEEGYQGAWYTAIIVNSLQNGKYVVEYLTLKTNDLTEQLREEADASDIRPVPPDIQHRHRYVLREWVDAWYNDGWWKGQVCGFACFRYSVYFWPTKEQLEFEHCHLRPHQEWIDGRWVHA 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01211 521 Gene3D - 188 275 - -
Arst4g01211 521 Gene3D - 382 460 - -
Arst4g01211 521 CDD Tudor_Agenet_AtDUF_rpt2_4 464 509 - -
Arst4g01211 521 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 1 183 - -
Arst4g01211 521 MobiDBLite consensus disorder prediction 1 22 - -
Arst4g01211 521 CDD Tudor_Agenet_AtDUF_rpt1_3 393 454 - -
Arst4g01211 521 MobiDBLite consensus disorder prediction 1 18 - -
Arst4g01211 521 SMART agenet_At_2 198 267 IPR014002 -
Arst4g01211 521 SMART agenet_At_2 389 457 IPR014002 -
Arst4g01211 521 SMART agenet_At_2 2 72 IPR014002 -
Arst4g01211 521 SMART agenet_At_2 270 325 IPR014002 -
Arst4g01211 521 SMART agenet_At_2 74 139 IPR014002 -
Arst4g01211 521 SMART agenet_At_2 460 515 IPR014002 -
Arst4g01211 521 CDD Tudor_Agenet_AtDUF_rpt2_4 276 319 - -
Arst4g01211 521 CDD Tudor_Agenet_AtDUF_rpt1_3 200 264 - -
Arst4g01211 521 Pfam Agenet domain 394 454 IPR008395 -
Arst4g01211 521 Pfam Agenet domain 203 264 IPR008395 -
Arst4g01211 521 Pfam Agenet domain 79 134 IPR008395 -
Arst4g01211 521 Pfam Agenet domain 7 69 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01211 Arst-Chr4 11675067 11678695 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01211 400 513 PHD Transcription Factor Family AT5G58610 25.185 1.83e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01211 - - adu:107483399 1097.8