Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01198 ATGGCTGTGAGTTGCTCTGAGTTGATTGAAGATACCGTTTTAGAGACTCATGTTACCACATTTACTCCAACGGTTTGTTCTGGAAGCTGTGCTGATATTGGACCAAGGGGATCCATGGATGATGAGCACATCCAAATAGATGATCTAGCTGCCCACCTTGGATTTGTGTTCAAATACCCTATACGGAGTGCATTTTATGCAGTTTTTGATGGGCGAGGGCCTAATGCAGCTGCTTTCATTAAGAGGAATGCAATTAGATTATTTTTTGAAGACACCAATATGATGCAATCATATGATACAGATGCACTTTCCCTAAAATGGTTGGAGGATTCTCATAGGAAAGCATTCTTAGGGGCAGACCTTGCCTTGGCTGGTGAACGGAGTGTTAGTCATACTTATGGGACAACAGCATTGACTGCCCTTATACTTGGAAGGCATTTACTGGTTGCCAATGCTGGTGATTGTCGAGCAGTTCTTTGTAGGCGAGGAGTAACAGTTGAGATGTCTCATGATCACAGACCGAGTTATTTACCAGAACGGAGGAGAGTGGAAGAGTTAGGTGGTTTCATCTATGATGGGTATCTCAATGGTGATCTTTCTGTCACCCATGCCCTTGGTGATTGGAAGTTGAAGTATCCATTTGGGACTGCGTTGCCTCGTATTGTTCCAGATATTCAAGTATTTACATTGACAGAGAAGGACGAGTTCTTGATTATTGGGTGCGACGGCATTTGGGATGTAATGTCAAGCCAGGAAGCAGTTAGTTTCGTGCGTCGACAATTGAGAAGGCATGATGATCCACAACAATGTGCCAAAGAACTAGTTAAGGAAGCATTGCACCTCAATACAACAGATAATCTTACTGTGATTGGTATATGCTTATCCCCGGTGGAAAAGATTGTTGAATCTCTCCCACCGCATAGGCGAAGATTCAGAGCTTGCTTCCTATCTGAAGAGGCCAGATTGAGGAGCTTACTTGAAGGAAAATAA 990 0.4333 MAVSCSELIEDTVLETHVTTFTPTVCSGSCADIGPRGSMDDEHIQIDDLAAHLGFVFKYPIRSAFYAVFDGHXGPNAAAFIKRNAIRLFFEDTNMMQSYDTDALSLKWLEDSHRKAFLGADLALAGERSVSHTYGTTALTALILGRHLLVANAGDCRAVLCRRGVTVEMSHDHRPSYLPERRRVEELGGFIYDGYLNGDLSVTHALGDWKLKYPFGTALPRIVPDIQVFTLTEKDEFLIIGCDGIWDVMSSQEAVSFVRRQLRRHDDPQQCAKELVKEALHLNTTDNLTVIGICLSPVEKIVESLPPHRRRFRACFLSEEARLRSLLEGK 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01198 330 FunFam Probable protein phosphatase 2C 22 10 298 - -
Arst4g01198 330 CDD PP2Cc 27 295 IPR001932 -
Arst4g01198 330 ProSiteProfiles PPM-type phosphatase domain profile. 26 295 IPR001932 -
Arst4g01198 330 PANTHER PROTEIN PHOSPHATASE 2C 28 292 IPR015655 GO:0004722|GO:0006470
Arst4g01198 330 Pfam Protein phosphatase 2C 36 287 IPR001932 -
Arst4g01198 330 SMART PP2C_4 16 293 IPR001932 -
Arst4g01198 330 Gene3D - 11 300 IPR036457 -
Arst4g01198 330 SUPERFAMILY PP2C-like 17 297 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01198 Arst-Chr4 11218411 11220647 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01198 12 330 PP2C-type Phosphatase Gene Family AT1G48040 58.204 3.19e-123 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01198 K14803 - gmx:100798957 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g01198 4 11218411 11220647 Arst4g01198 4 11218411 11220647 ECH
Arst1g03258 1 93614270 93616502 Arst4g01198 4 11218411 11220647 PCT