Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01135 ATGAAGAAAGTCATAGCAGCCAGAAGCCGAAAACGTAAACAAGATCGCTCTCGCGCACAAGAAGAAGTTTCTGATGATGAACATGTAACAGTCAAAGCCTCAGGTAAGAAAGGTTCTTATGCACAAGATAAGTCATTCAGTTTCTTCCTTTCAGACCCAGACGTCCTTGATTGCCCCATTTGCTTTAATCCTTTCACCACTCCAGTCTATCAGTGTGAAAATGGTCATGTTGCTTGCTCTGTTTGCTGCTCGCGCATTCTTGAGAAAAAGTGTGCCTCGTGCTCCTTGCCAATAGGTTCCATTCGTAGCAGAGCCTTGGAGAAAGTTCTGGAATCTATTCAAGTTCCATGCACTAATGCCGAATACGGTTGCACGGAAACACTGCGTTACAGTGACAAGTCTGGCCATGAATCCCAATGCAACTTTGTCCCATGCTCTTGTCCACACTCAGATTGTGACTTCGTTTCATCATTCTCGGATCTACCCGCCCACTATAGAACTGAGCATGGTTCCTCTGCCAGCGCCGGAGTGAGGTTTTTGTACGATAAGCCTTTCAAGGTCACACTGGATTCTGATGATGACGTCACTATACTTCAAGAAGTGAATGGTGGAAAGTTGTTCATAGTCCAGAATTTTGTGGCGGGTCTTGGAAATGCTGTCAGTGTTTTCTGCATTCAGCCAGAGTTATTGCCTAACTATCGGTGCCAAATTTCGGCCAAGTCAAATGGATGCAGTCTAGTGATGAATTCTTTTACAAAAAACACTCAAAACTCTGCTATGGCTACTATTCTTTCATCAAGGTTTCTGGTCATTCCAACTGATTATTTTGGTGCCGGTCAACCTCGCAATTTAGAAATTAGCATATTTAGGTCATATGAATAG 882 0.4354 MKKVIAARSRKRKQDRSRAQEEVSDDEHVTVKASGKKGSYAQDKSFSFFLSDPDVLDCPICFNPFTTPVYQCENGHVACSVCCSRILEKKCASCSLPIGSIRSRALEKVLESIQVPCTNAEYGCTETLRYSDKSGHESQCNFVPCSCPHSDCDFVSSFSDLPAHYRTEHGSSASAGVRFLYDKPFKVTLDSDDDVTILQEVNGGKLFIVQNFVAGLGNAVSVFCIQPELLPNYRCQISAKSNGCSLVMNSFTKNTQNSAMATILSSRFLVIPTDYFGAGQPRNLEISIFRSYE 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01135 293 CDD RING-HC_SIAHs 56 95 - -
Arst4g01135 293 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 12 290 IPR044286 -
Arst4g01135 293 Pfam Seven in absentia protein family 101 273 IPR018121 GO:0005737|GO:0006511|GO:0007275
Arst4g01135 293 SUPERFAMILY TRAF domain-like 112 277 - -
Arst4g01135 293 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 5 113 IPR013083 -
Arst4g01135 293 MobiDBLite consensus disorder prediction 14 28 - -
Arst4g01135 293 ProSiteProfiles Zinc finger SIAH-type profile. 112 170 IPR013010 GO:0008270
Arst4g01135 293 MobiDBLite consensus disorder prediction 1 28 - -
Arst4g01135 293 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 114 164 IPR013083 -
Arst4g01135 293 FunFam E3 ubiquitin-protein ligase SINAT3 109 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01135 Arst-Chr4 10151763 10153034 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01135 54 179 C3H Transcription Factor Family AT2G41980 37.500 3.06e-23 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01135 K04506 - gmx:100797881 232.261