Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01133 ATGTGCAGCAGTAGCGTCAGGGCACCAATGGAGAATAATAATAATTACAAGCATCAGGGTGATTTAACCGATATACTCCGTGGAGGACCATACGGCGGTGCTGCCACTGCTTCCGATGAACCGCCCTCTTCATATCACTGGCAACAGCAACTTGAAAACGATACCACCGCCTGCTACTTTGGGGATCCATTTTCAACCATGAGAGATCCTTTCCTTCACCAGCTCCACATCCCTCCTACTTCTTCCTCCTCTTACTTCGAAGAACCACCGCTACCACCGCCACCGCTGCCGCCGCCGCCGCCTACCTTGCCTACTCCATGTTATAACAGTTATGGTGGTGCACACCTTCAACATGACATGAGATCTTCCTCCTCCTCTTCTTCTTCCTCTTCTTCTTCAATTAGCTGCAACAACATATTCTCGAACATGATTCAGATCTCTCCCAGCACTAATAACACTTCTTCTTCTTGTTCCTCTTCGTCTTCTTCAAAATTAGCCATCTCTTCCTCTTCTTCTTCTCCTCCTTCTATGCTCTCAAATGTTAACGCCATGGTCAATGCAACATCAATCCCCTCCAACAAGCAAGATTGCCATCTTCTCGACAACGCTTCCGCACTTCAGATCTCATCTCCGCGCAATCCCGCTCTTAAGCGCAGGAAGAATCAGGCGAAAAAGGTGGTGTGTATTCCTGCACCAGCAGCTGCAAACAGCAGACAAACTGGAGAGGTTGTTCCTTCAGATTTGTGGGCTTGGAGGAAATACGGTCAGAAACCTATCAAAGGTTCACCTTATCCAAGGGGATATTATAGATGCAGCAGCTCAAAGGGTTGTTCAGCAAGGAAACAAGTAGAGAGGAGCAGAACAGACCCAAACATGCTTGTTATTACTTACACTTCAGAGCATAATCATCCATGGCCTACTCAGAGAAACGCTCTTGCTGGTTCAACAAGGTCTCAGCCATCCAAGAACAACACCAATGCTAATATTGCTTCTTCAAAGAATTCAGAAACCTCAAAGGTTTCTGGTAATAATAACAAGCCAAAGGAGGAGAATAATAATCAGCAGCATGAGAGAGGCAACAACAACAGTCAAGGAGGGAGTGCTTCAGTAGTGAAGGAAGAGATGGATCATCATCATCATAGCAATCATGATCTTGAGCTTGAGTTGGATAATGATGAAGAATTCAGTGATGGACTTTCATACAAGCCATCAATGATTGAAGAGGGTAGTAATAACAATAACCAATCTTCTGAGGATTTCTTTGCAGATTTGGGAGAAATTGAAGCTGATCCATTGAACCTGTTGTTCAGTAGTCATCAAGGTTTCAATGCAGGTGGTGGTGGTGGTGGTGGTGGTGATAATCAAAGGGAATCCAAGGCCTTAGATCCATTCAATCTCTTTGATAATTGGTCTTCAGGAGACACTAATAACAACAACTCATCATTTGAAGAACCTAATAATAAGGGAAGGTTATAA 1476 0.4438 MCSSSVRAPMENNNNYKHQGDLTDILRGGPYGGAATASDEPPSSYHWQQQLENDTTACYFGDPFSTMRDPFLHQLHIPPTSSSSYFEEPPLPPPPLPPPPPTLPTPCYNSYGGAHLQHDMRSSSSSSSSSSSSISCNNIFSNMIQISPSTNNTSSSCSSSSSSKLAISSSSSSPPSMLSNVNAMVNATSIPSNKQDCHLLDNASALQISSPRNPALKRRKNQAKKVVCIPAPAAANSRQTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNNTNANIASSKNSETSKVSGNNNKPKEENNNQQHERGNNNSQGGSASVVKEEMDHHHHSNHDLELELDNDEEFSDGLSYKPSMIEEGSNNNNQSSEDFFADLGEIEADPLNLLFSSHQGFNAGGGGGGGGDNQRESKALDPFNLFDNWSSGDTNNNNSSFEEPNNKGRL 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01133 491 MobiDBLite consensus disorder prediction 85 106 - -
Arst4g01133 491 MobiDBLite consensus disorder prediction 443 491 - -
Arst4g01133 491 MobiDBLite consensus disorder prediction 297 349 - -
Arst4g01133 491 MobiDBLite consensus disorder prediction 1 20 - -
Arst4g01133 491 MobiDBLite consensus disorder prediction 371 387 - -
Arst4g01133 491 ProSiteProfiles WRKY domain profile. 240 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst4g01133 491 MobiDBLite consensus disorder prediction 151 176 - -
Arst4g01133 491 MobiDBLite consensus disorder prediction 1 46 - -
Arst4g01133 491 MobiDBLite consensus disorder prediction 116 130 - -
Arst4g01133 491 SUPERFAMILY WRKY DNA-binding domain 243 306 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst4g01133 491 FunFam probable WRKY transcription factor 14 219 299 - -
Arst4g01133 491 MobiDBLite consensus disorder prediction 468 491 - -
Arst4g01133 491 Gene3D WRKY domain 219 299 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst4g01133 491 SMART WRKY_cls 245 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst4g01133 491 MobiDBLite consensus disorder prediction 76 130 - -
Arst4g01133 491 Pfam WRKY DNA -binding domain 247 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst4g01133 491 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 110 436 IPR044810 GO:0003700
Arst4g01133 491 MobiDBLite consensus disorder prediction 297 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01133 Arst-Chr4 10097095 10101245 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01133 1 479 WRKY Transcription Factor Family AT1G30650 40.443 1.18e-86 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Arst4g01133 WRKY 2.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01133 - - gmx:100805707 412.535