Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01125 ATGGGTGCTCCTAAGCAGAAATGGACATCTGAAGAGGAAGCAGCTCTTAAAGCTGGAGTTGTCAAGCATGGGGTTGGTAAATGGCGTACAATACTCAAGGATCCAGAATTTAGTGGTGTTTTGTATCTGCGGTCCAATGTGGATCTCAAGGATAAATGGAGAAATCTGAGTGTGATGGCAAATGGATGGAGTTCTAGGGAAAAGTCTAGGTTGGCTATCAGAAGGGTGCATCAAGCCCCAAAACATGACGAGAACCCTTTTGCTGTCGCTCCTTTTACTCCAAGTGATGAAGATATTGTTGATGTTAAGCCTATTCAAGCTTCCAGAGATGTGGTGCCATTTTCTGGTCCAAAAAGGTCTATTGTAAGATTGGATAACCTTATAATGGAGGCAATAACTACCTTGAAGGAAACTGGTGGTTCTAATAAGACAACTATTGCAGCTTTCATAGAGGTAAAACGCAGATATAGGATTGCACCTACGCCAGCATATTCTGACAGAAGAAGAAGTTCAAGCTTGTTAATGGATGGGAGGCAGAAAGCCTCTTTGAGAGGTGACAAGGAAGAGACCAATGTCCTTACGAAGTCTCAGGTAGATTTAGAATTAGCAAAGATAAGGTCGATGTCTGCACAAGAGGCAGCTGCAGTTGCTGCTCGAGCAGTTGCAGAAGCAGAAGCTGCCATAGCAGAAGCTGAAGAGGCAGCAAGAGAGGCAGAGGCAGCAGAAGCTGATGCAGAAGCGGCACAAGCTTTTGCAGATGCTGCTATGAAAACACTGAAGGGTCGAAACACCCCAAAGATGATGATCCATGCTTAA 816 0.4461 MGAPKQKWTSEEEAALKAGVVKHGVGKWRTILKDPEFSGVLYLRSNVDLKDKWRNLSVMANGWSSREKSRLAIRRVHQAPKHDENPFAVAPFTPSDEDIVDVKPIQASRDVVPFSGPKRSIVRLDNLIMEAITTLKETGGSNKTTIAAFIEVKRRYRIAPTPAYSDRRRSSSLLMDGRQKASLRGDKEETNVLTKSQVDLELAKIRSMSAQEAAAVAARAVAEAEAAIAEAEEAAREAEAAEADAEAAQAFADAAMKTLKGRNTPKMMIHA 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01125 271 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Arst4g01125 271 Gene3D - 2 59 - -
Arst4g01125 271 FunFam Telomere repeat-binding factor 1 8 86 - -
Arst4g01125 271 Coils Coil 214 251 - -
Arst4g01125 271 SMART sant 4 59 IPR001005 -
Arst4g01125 271 Pfam Myb-like DNA-binding domain 5 56 IPR001005 -
Arst4g01125 271 SUPERFAMILY Homeodomain-like 2 71 IPR009057 -
Arst4g01125 271 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 33 IPR017930 -
Arst4g01125 271 PANTHER SINGLE MYB HISTONE 4 151 265 IPR044597 GO:0003691
Arst4g01125 271 MobiDBLite consensus disorder prediction 167 188 - -
Arst4g01125 271 SUPERFAMILY "Winged helix" DNA-binding domain 117 156 IPR036390 -
Arst4g01125 271 CDD SANT_TRF 6 56 - -
Arst4g01125 271 FunFam Telomere repeat-binding factor 1 2 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01125 Arst-Chr4 10044999 10049377 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01125 1 271 Single Myb Histone (SMH) Gene Family AT1G49950 58.224 1.36e-81 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Arst4g01125 Myb_DNA-binding 1.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01125 K09422 - gmx:100780698 325.479