Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01098 ATGGCACAACCTGGGTGTGATTTAATGTGTGGAGATGTTGAGATCCCTTACCCATTTGGAATGAAGGATCCAAAATGCTATGCAGAGGAGTGGTTCCAAGTAGAATGCAAGAGTAACCACACACCATATCTGAAGCTTATAAACCTTGAAGTGACAGCCATTGACGTTAACATTAGCACCGTTGAAGTCAAGAATCCAGTTTTCCACAGGAAGTGTCACGATGGAGGCAAAGATTCTTCTCTCTCTCGTCCCAAACCAACCATAGAAGATCCTGCAGGTATTTCTTTGAGAGGTAGCCCCTTTGTGTATTCCAACAAGCGCAACACATTCGTAGCTTTCGGTTGCAACATTCTTGGATTCTTGCACTCTAACCGTTCAGTAGTCGCTGGGTGCGTGTCAGTTTGCGGTCCAAAAGAGTTCACAAGACTCAAGAAATCGGTTGCCAGTGGAAAAAAGGTTAATCTTGGTTGCCATGGAAAGTTCTGTTGTGTTGCTTCAATACCAAGTTATCTATCAGAGTATGAGGTGACAATGGAAGATATAAGAAATGGAAGCATTGCTCCTGGGTGCGACGACTATGCGCTGATAGCAAAAAAATGGAGAAAGGAATTAACATGGATGGTGAATCAGAAAGAGAGTGAACTCAAGAAGAATGTGAGTCACTATGCACATGCTGTGCTGGAGTTTGAGATTCTGAATTGGTTCAACATTGAAGCAACTAATGCAGAATGTCTTAAGACTAATGTAACGTCCTCAAAAATGGAGAATTCAGGTTGGAGATGCAAATGCAGAGTAGGATTCCATGGGAACCCATACATTGCTGGTGGCTGTGTAGTTATTCGAGACCGTTGGTACCATTCCGAAGGAACTCCCACAAAAGAGCTTATGGTTGGACTTTTGTCAAGCCTCGGATCCATTATTTTATTGCTGGGTCTAAGGTGGCTCTATGAAGTTGAAAGGAAAAGAATAGCGAAAAAAAGCAGAGAAAGTTTCTTCAAAAAGAATGGTGGTGTGTTGTTAGAAAAGGTATTGTCTTCTAGTGAAGGTAGTTTTGATAAATTTAAACTCTTCAGCTTAAAGGAATTAGAGAAGGCCACAAACCACTTTAATGTGAACCGGATACTTGGAAATGGAGGTGAAGGTACTGTTTACAAGGGCATGCTACTAGATGGTAAAATTGTGGCTGTCAAGAAGTTTAAGGTCCAAGGAAAGATAGAACAATTCATCAATGAATTTGTTATTCTTTCGCAAATTGACCACAGAAATGTGGTTAAACTGTTGGGGTGTTGTTTGGAAACAGAGATTCCTCTGCTTGTTTATGAATTCATTCCCAATGGGACCCTTTTCCAATATTTGCATGACCAAGATGCATATCTACCAATGACATGGGAAATGCGTTTAAAGATTGCCATTGAAGTTGCAGGAGCTCTATTCTATTTACATTCAGCAGCTTCTAAGCCCATTTATCATAGAGATATCAAATCGACCAATATACTATTGGATGAAAAGTACAATGCAAAGGTGGCTGATTTTGGAACATCCAAAATGATTGCTATTGAAGACACTCACCTCACCACAATAGTTAAAGGAACTTTCGGATACTTGGATCCTGAATATTTTCACACTAGTCAATTTACAGACAAGAGTGATGTTTATAGTTTCGGAGTAGTTCTTGTTGAACTTTTAACAGGGCAAAAGCCGGTTTCCTTTGTTGCCCCGGATGAGGCGCAAAATTTAGCATCATACTTTATTTTGTGCATGGAGGAAAAACGTGTGTTTGACATCATTGACAAAAGAATCATGTGGGAAGGACGGAGAAAGCATATCAATGCAGTTGCCAAGCTTGCCAAAAGATGTTTAGACCTGAAAGGTATTAAGCGGCCTAGTATGAAGGAAGTCTCAATGCAATTATATGGTATCTGGGAGTTGCAAAGGAATTCTAGAGCATAA 1950 0.4031 MAQPGCDLMCGDVEIPYPFGMKDPKCYAEEWFQVECKSNHTPYLKLINLEVTAIDVNISTVEVKNPVFHRKCHDGGKDSSLSRPKPTIEDPAGISLRGSPFVYSNKRNTFVAFGCNILGFLHSNRSVVAGCVSVCGPKEFTRLKKSVASGKKVNLGCHGKFCCVASIPSYLSEYEVTMEDIRNGSIAPGCDDYALIAKKWRKELTWMVNQKESELKKNVSHYAHAVLEFEILNWFNIEATNAECLKTNVTSSKMENSGWRCKCRVGFHGNPYIAGGCVVIRDRWYHSEGTPTKELMVGLLSSLGSIILLLGLRWLYEVERKRIAKKSRESFFKKNGGVLLEKVLSSSEGSFDKFKLFSLKELEKATNHFNVNRILGNGGEGTVYKGMLLDGKIVAVKKFKVQGKIEQFINEFVILSQIDHRNVVKLLGCCLETEIPLLVYEFIPNGTLFQYLHDQDAYLPMTWEMRLKIAIEVAGALFYLHSAASKPIYHRDIKSTNILLDEKYNAKVADFGTSKMIAIEDTHLTTIVKGTFGYLDPEYFHTSQFTDKSDVYSFGVVLVELLTGQKPVSFVAPDEAQNLASYFILCMEEKRVFDIIDKRIMWEGRRKHINAVAKLAKRCLDLKGIKRPSMKEVSMQLYGIWELQRNSRA 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01098 649 FunFam Wall-associated receptor kinase 2 443 649 - -
Arst4g01098 649 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 2 640 IPR045274 GO:0007166
Arst4g01098 649 SMART serkin_6 369 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g01098 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
Arst4g01098 649 SUPERFAMILY Protein kinase-like (PK-like) 351 638 IPR011009 -
Arst4g01098 649 Gene3D Phosphorylase Kinase; domain 1 341 442 - -
Arst4g01098 649 FunFam Wall-associated receptor kinase 2 339 442 - -
Arst4g01098 649 Gene3D Transferase(Phosphotransferase) domain 1 443 648 - -
Arst4g01098 649 ProSiteProfiles Protein kinase domain profile. 369 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g01098 649 Pfam Wall-associated receptor kinase galacturonan-binding 6 64 IPR025287 GO:0030247
Arst4g01098 649 CDD STKc_IRAK 375 633 - -
Arst4g01098 649 Pfam Protein kinase domain 370 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01098 Arst-Chr4 9764812 9768442 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01098 6 640 Receptor kinase-like Gene Family AT1G69730 42.458 1.63e-179 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Arst4g01098 Pkinase 4.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01098 - - adu:107483204 1300.42