Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01096 ATGTTTCTTCAACTTGCGTTTGATATCATACTAACATTTCTATGCTTCGTACATACTCTGGAATCTGCACAAATCACAATCTCACCGAAGTGTGATTCCATGTGTGGAGAAGTTGAGATCCCTTACCCGTTTGGAATGAATGATCCCGCGTGCTATGCGGGTAAGTGGTTTGAAATAGAATGCTTGAACAAACCCATGAACAACGTTCCCACTCTCACCCCTTACCTGAAAGCCACAGACCTGGAAGTGAGTTCCATCGATGCGTCGCGCAGCACGGTTACTATATCGAGCTTGACCTTCACTTTGAACTGCCATGGCGATGGCGTCATTTCTGGGCCAGTCATACACCTGAGAGGGAGCCCCTTTGTGTACTCCCAAGAAAGAAACAAATTCGTGGCCATGGGCTGCAACCTTGTTACATATCTACTCTCAAACGCCGTACAAGTTGGCGCGTGCGCATCGATTTGCGACAGCAACGATGATATTTTCTTCCACAGCATATCCGGCAATTATTGCAGCGGTAAATATTGCTGTGAGTCTTCGTTGCCTTTGTACCTCTCAGAATTCAACGTTACTTCTGAAAGGCTCGCAGGAAAGAATAGGAGCCAATCGGACTGCAGTTATGCGATGATTATAGAAGAAGCTGTTTGGGAGTCGGAGAGTGCTGAGCTGGCAGACTTAACCAATTTAAAATTCACCGCGGTGCTTGCGTGGGAGATTGTGGACTCAAGTTTGGAACTGCCTGATAACTGCCAAAACAGTTATATCACATCTTCGGAACGGAGTCACTCAGGTCGCACATGTAATTGCTACGACGGTTTCGTTGGCAATCCTTACATTCCGGGAGGCTGTATTAAAGTTATTAAAGGGATATCTTCAAATTGTGAAAGTGAAACTATTCATCACCGCGGATCGGTATACTTAGGTTTAGCAACAATTTTGGCAAGCGTCGTAGGATCCATCATATTACTCCTTCGTTCGTGGTGGTTGCATAAAGTTGTAAGAAAAAGAGTAGCAAAGAAACGCAAAGAAAAAAACTTCAAACAAAATGGAGGATTGTTGCTACAACAGAGATTGTCCACGGGTGAAGTTAGTGTTGAAAAAGTTAAACACTTGAGCCTGAAGGATTTGGAGAAAGCCACAGACAGCTTTAATGTGAACAGAGTACTTGGAAAAGGAGGCCAAGGTACTGTCTACAAGGGCATGCTTGTTGATGGTCAAATTGTAGCAGTTAAAAAGTTCAAAGTTGAGGGAAATGTTGAAGAATTCATCAACGAATTCGTCATTCTTTCACAAATTAACCATAGAAATGTGGTTAAGTTGTTAGGGTGTTGTTTGGAGACAGAAATTCCTCTGCTTGTTTATGAATTCATTCCTAATGGTAATCTCTTCCAATATTTGCATGACCAAAATGAGGACTTACCAATGACATGGGAAATGCGTTTGAGAATTGCCACTGAAGTTGCAGAAGCTATATTTTATTTACACTCTGCTGCTTCTCAACCCATTTATCATAGAGATGTGAAATCAACAAATATTTTGTTGGATGGAAAGTACAGAGCAAAAGTAGCTGATTTTGGAGCATCTAAAATGATTTCTCTTGAAGATACTCACCTCACAACCGCAGTTCAAGGAACCTTTGGCTATTTAGATCCCGAATACTTTCATACAAGTCAATTAACAGAGAAAAGTGATGTGTATAGTTTCGGAGTAGTTCTTGTCGAGCTTCTAACCGGACAAAAACCAATATCATCGTCGAGAACGGAAGAAGCCAAAAGTTTGTCTCATTATTTTCTTTGTTCTATGGAGGAAAATCGTGTATTTGATATCATTGACGAAAGGGTGACAAAAGAGGGGGAGAAAGAGCATATAATTGCAGTTGCTAATCTTGCATATAAGTGCTTGGAGTTAAATGGGAGAAAAAGACCTAGTATGAAAGAAGTTGCAAGTGAACTATATAGGATCTTGAAATTGGAAATGAAGCCTAGCACACAACAAAACATTGAAGAAACTGAGTTTGCTGGAATTGAAGAATATCAATCTTGGGCTGCATCTTCTGTTTCTGATACAGGTTCAAATTCAACTCTAAGCAACACAATACCCACTTCAAAGTCAGAGATAATAATGCCTATTTTCTTCAAATAA 2145 0.4075 MFLQLAFDIILTFLCFVHTLESAQITISPKCDSMCGEVEIPYPFGMNDPACYAGKWFEIECLNKPMNNVPTLTPYLKATDLEVSSIDASRSTVTISSLTFTLNCHGDGVISGPVIHLRGSPFVYSQERNKFVAMGCNLVTYLLSNAVQVGACASICDSNDDIFFHSISGNYCSGKYCCESSLPLYLSEFNVTSERLAGKNRSQSDCSYAMIIEEAVWESESAELADLTNLKFTAVLAWEIVDSSLELPDNCQNSYITSSERSHSGRTCNCYDGFVGNPYIPGGCIKVIKGISSNCESETIHHRGSVYLGLATILASVVGSIILLLRSWWLHKVVRKRVAKKRKEKNFKQNGGLLLQQRLSTGEVSVEKVKHLSLKDLEKATDSFNVNRVLGKGGQGTVYKGMLVDGQIVAVKKFKVEGNVEEFINEFVILSQINHRNVVKLLGCCLETEIPLLVYEFIPNGNLFQYLHDQNEDLPMTWEMRLRIATEVAEAIFYLHSAASQPIYHRDVKSTNILLDGKYRAKVADFGASKMISLEDTHLTTAVQGTFGYLDPEYFHTSQLTEKSDVYSFGVVLVELLTGQKPISSSRTEEAKSLSHYFLCSMEENRVFDIIDERVTKEGEKEHIIAVANLAYKCLELNGRKRPSMKEVASELYRILKLEMKPSTQQNIEETEFAGIEEYQSWAASSVSDTGSNSTLSNTIPTSKSEIIMPIFFK 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01096 714 SUPERFAMILY Protein kinase-like (PK-like) 366 653 IPR011009 -
Arst4g01096 714 ProSitePatterns Serine/Threonine protein kinases active-site signature. 503 515 IPR008271 GO:0004672|GO:0006468
Arst4g01096 714 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 22 660 IPR045274 GO:0007166
Arst4g01096 714 Pfam Protein kinase domain 385 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g01096 714 SMART serkin_6 384 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g01096 714 CDD STKc_IRAK 390 655 - -
Arst4g01096 714 FunFam Wall-associated receptor kinase 2 458 674 - -
Arst4g01096 714 Gene3D Phosphorylase Kinase; domain 1 344 457 - -
Arst4g01096 714 Pfam Wall-associated receptor kinase galacturonan-binding 31 96 IPR025287 GO:0030247
Arst4g01096 714 Pfam Wall-associated kinase 171 270 IPR013695 GO:0004674|GO:0016020
Arst4g01096 714 ProSiteProfiles Protein kinase domain profile. 384 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g01096 714 FunFam Wall-associated receptor kinase 2 354 457 - -
Arst4g01096 714 Gene3D Transferase(Phosphotransferase) domain 1 458 679 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01096 Arst-Chr4 9746753 9750619 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01096 31 710 Receptor kinase-like Gene Family AT1G16260 43.484 1.27e-173 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Arst4g01096 Pkinase 6.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01096 - - ahf:112796208 988.793