Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01091 ATGATTCTTCAATCTGCATTTCACTACTATTCTCATATCATTTTGATGATAATATCCATATATCCATTGTTGTTGGCATGTGCAAAAGATCTTACCATAGCAAAACCTGGTTGTGTTTCCACATGTGGGAACGTTGACATCGCTTACCCTTTTGGTATGAACGACTCCAATTGCTATGCTCACAAATTTTTCGAGATAGAGTGCAAAAATCACAAGCCTTACCTTGCAACATTCAATCTTGAGGTCACACAAATTTATGTAAACGTTAGCACAGTGGAGATCAAGAACCCAATCTACTATAGCTGCCAAAGCAAAAATGCTTTCATAAACCTAACAGGAAGCCCTTACGTGTATTCCCAAGAATACGACAAATTCATGGCCATTGGTTGCAACAAACTAGGGTTCTTGCGTTCCAACGGTTCAAAGGTTGGCGGTTGCGTGTCCATCTGCGACGGCGATGAAGCGGTTGGAAAGGTTGAATTCGGAAACGACGGTTGCCATGGGAGATACTGCTGTGAGACTTCACTGCCTATGCATGTTTGGGAGTACAACGCAACAATAAGGGATATTATTATTGGAGATGGAAGTGAGAGCAACACGTGTAGCTATGCCATGATTGTGAGTGATGCTTGGCTTCACAGTTATGGTTTGGGGATTCAGAAACTTAGTAACGTAGAGAACATGATTGATGTTCCTGCTGTTCTTGAGTGGGAGATTCGGTATGATATGGGGATCAATTCAACACTCTCTCCTTCTCGTGCTTGTTGTGACGGTTCGAGTCTTACGTCTCCAAGCAACACTTCCTCTGGTTTTAGGTGTCGCTGCTTGGATGGTTACGATGGCAATCCCTACATTCGAGGGGGTTGCAACGAAACAAAGATTTTCCACCACAAAAACTCAAAATCAAAAAAACACGCCATGTATGCAGGAGTTTCATCAAGTCTTGGGTCAGTCATTTTACTCCTTGGTGGATGGTTGTTGTACAAACTTATAAGGAAGAGAATAATAAAGAAACGCAAGGAAAAGTTCTTCAAGAAAAATGGCGGTTTGTTGTTAAAACAAAAGTTGTCTTCAGGCGAAGAAAATGTTGACAAAGTTGTTCTCTTCACCTTAAAAGAATTAGAAAATGCCACTGACAACTTCAATCTAAATAGAATTCTTGGAAAAGGAGGCCAAGGTACCGTTTACAAGGGAATGCTAGTAGATGGCAAAATCGTTGCAGTTAAAAAGTTCAAAGTCCAAGGAAACACTGCAGAATTCATCAATGAATTCGTTGTTCTTAATCAAATTAACCATAGAAATGTGGTTAAGTTATTAGGGTGTTGTTTGGAGGATGAAGTTCCTTTGCTCGTTTATGAATTTATTCCCAATGGTAACCTTTATGAACATCTTCATGAACAAAATGAAGATTTACCAATGACATGGGACATGAGATTGAGAATTGCCAGTGAGATTGCAGGAGCACTTTTTTACTTACACTCCATTGCTTCTCAACCCATTTATCATAGAGATATCAAATCAACAAACATACTATTGGATGAAAAATACAGGGCAAAAGTAGCAGATTTTGGAACCTCTAGAATAGTTTCTGCTGAAGCTACTCATCTCACTACGGTAGTTCAAGGAACTTTTGGTTATTTAGATCCTGAATACTTTCAAACTAGTCAGTTTACTGATAAGAGCGATGTTTATAGTTTCGGAGTAGTGCTTGTCGAACTTTTAACCGGACAGAAGGCAATATCGTCGATAAGATCGGACGAAGTGAGGGGTCTAGCTTCGTTTTTTGTTGTGTGTATGGAAGAGAATCGGGTATTTGACATTGTTGACAAAAGAGTGTTGAAGGAGGGAGAGAAAGAACATATAATTGCAGTGGCTAATCTTGCATATAGATGTTTAGAGTTGAATGGGAGAAAAAGGCCTACTATGAAACAAGTTACCTTGGAATTAGAAGGGATTAGAAGATTGGATTATTGGAAGGGTGGTTCGGCACAAGAAAACTTTGAAGAAATTGAGCTTGATAGAAATGAAGACAATCAACTATGGGATGGATATTCATATTCTAATGTGTCAGAAACATTGCACACTACTACAAGTAGCAGCAGGGAACTCTCCGAGGTTATGCCTATTCTTAAAATCAAATAA 2142 0.3922 MILQSAFHYYSHIILMIISIYPLLLACAKDLTIAKPGCVSTCGNVDIAYPFGMNDSNCYAHKFFEIECKNHKPYLATFNLEVTQIYVNVSTVEIKNPIYYSCQSKNAFINLTGSPYVYSQEYDKFMAIGCNKLGFLRSNGSKVGGCVSICDGDEAVGKVEFGNDGCHGRYCCETSLPMHVWEYNATIRDIIIGDGSESNTCSYAMIVSDAWLHSYGLGIQKLSNVENMIDVPAVLEWEIRYDMGINSTLSPSRACCDGSSLTSPSNTSSGFRCRCLDGYDGNPYIRGGCNETKIFHHKNSKSKKHAMYAGVSSSLGSVILLLGGWLLYKLIRKRIIKKRKEKFFKKNGGLLLKQKLSSGEENVDKVVLFTLKELENATDNFNLNRILGKGGQGTVYKGMLVDGKIVAVKKFKVQGNTAEFINEFVVLNQINHRNVVKLLGCCLEDEVPLLVYEFIPNGNLYEHLHEQNEDLPMTWDMRLRIASEIAGALFYLHSIASQPIYHRDIKSTNILLDEKYRAKVADFGTSRIVSAEATHLTTVVQGTFGYLDPEYFQTSQFTDKSDVYSFGVVLVELLTGQKAISSIRSDEVRGLASFFVVCMEENRVFDIVDKRVLKEGEKEHIIAVANLAYRCLELNGRKRPTMKQVTLELEGIRRLDYWKGGSAQENFEEIELDRNEDNQLWDGYSYSNVSETLHTTTSSSRELSEVMPILKIK 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01091 713 ProSitePatterns Serine/Threonine protein kinases active-site signature. 500 512 IPR008271 GO:0004672|GO:0006468
Arst4g01091 713 SMART serkin_6 381 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g01091 713 Gene3D Transferase(Phosphotransferase) domain 1 455 673 - -
Arst4g01091 713 CDD STKc_IRAK 387 652 - -
Arst4g01091 713 SUPERFAMILY Protein kinase-like (PK-like) 362 649 IPR011009 -
Arst4g01091 713 FunFam Wall-associated receptor kinase 2 351 454 - -
Arst4g01091 713 FunFam Wall-associated receptor kinase 2 455 672 - -
Arst4g01091 713 ProSiteProfiles Protein kinase domain profile. 381 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g01091 713 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 33 663 IPR045274 GO:0007166
Arst4g01091 713 Gene3D Phosphorylase Kinase; domain 1 353 454 - -
Arst4g01091 713 Pfam Wall-associated receptor kinase galacturonan-binding 38 95 IPR025287 GO:0030247
Arst4g01091 713 Pfam Protein kinase domain 382 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01091 Arst-Chr4 9614396 9621117 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01091 30 708 Receptor kinase-like Gene Family AT1G79680 41.851 6.75e-180 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Arst4g01091 Pkinase 1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01091 - - gmx:100798794 792.341