Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01088 ATGATTCTTCAATCTGCATTTCACTACTATTCACATATCATCATTTTGATGATAATATCCATATATCCATTGTTATTGGCATGTGCAAAAGATCCCACCATAGCAAAACCTGGTTGTGTTTCCACATGTGGGAACGTTGACATCGCTTACCCTTTTGGTATGAACGACTCCAATTGCTATGCTCACCAATTTTTCGAGATAGAGTGCAAAAATCACAAGCCTTACCTTGCATCATTCAATCTTGAGGTCACACAAATTTATGTAAACATTAGTACGGTGGAGATCAAGAACCCAATCTACTATAGCTGCCAAAGCAAAAACGCTTTCATAAACCTAAAAGGAAGCCCCTACGTGTATTCCCAAGAATACGACAAATTCATGGCCATTGGTTGCAACAAACTAGGGTTCTTGCGTTCCAACGGTTCAACGGTTGGCGGTTGCGTGTCCATCTGCGACGACGACGAAGCGGTTGGAAATGTTGAATTCGGGAACGACGGTTGCCATGGGAGATACTGCTGTGAGACTTCACTGCCTATGCATGTTTGGGAGTACAACGCAACAATAAGGGATATTGGAGATGGAAGTGAGAGCAACATGTGTAGCTATGCAATGATTGTGAGTGATGCTTGGCTTCAGAGTTATGGCTTGGGGATTCAGAAACTTAGTAACGTAGAGAACATGATTGATGTTCCTGCTGTTCTTGAGTGGGAGATTCGGTGTCGCTGCTTGGATGGTTACGATGGCAATCCCTACATTCAAGGGGGTTGCAACGCTGTGGCATCCGGTAAAGAAAACGGATCCAAGTGGGCTATAGTAGGAGTTTCATCAAGTCTTGGGTCAGTCATTTTACTCCTTGGTGGATGGTTGTTATACAAACTTATAAAGAAGAGAATAATAAAGAAACGCAAGGAAAAGTTCTTCAAGAAAAATGGAGGTTTGTTGTTAAAACAAAAGTTGTCTTCCGGCGAAGAAAATGTTGACAAAGTTGTTCTCTTCACCTTAAAAGAATTAGAAAATGCCACTGATAACTTCAATCTAAACAGAGTTCTTGGAAAAGGAGGCCAAGGTACCGTTTACAAGGGCATGCTAGTAGATGGCAAAATCGTTGCAGTGAAAAAGTTCAAAGTCCAAGGAAACACTGCAGAATTCATCAATGAATTCGTTGTTCTTAATCAAATTAACCATAGAAATGTGGTTAAGTTATTAGGGTGTTGTTTGGAGGATGAAGTTCCTTTGCTCGTTTATGAGTTTATTCCCAATGGTAACCTTTATGAACATCTTCATGAACAAAATGAGGATTTACCAATGACATGGGACATGAGATTGAGAATTGCCAGTGAGATTGCAGGAGCACTTTTTTACTTACACTCTATTGCTTCTCAACCCATTTATCATAGAGATATCAAATCAACAAATATACTTTTGGATGAAAAGTACAGGGCAAAAGTGGCAGATTTTGGAACCTCTAGAATAGTTTCTGCTGAAGCTACTCATCTCACTACGGTAGTTCAAGGAACTTTTGGTTATTTAGATCCTGAATACTTTCAAACTAGTCAGTTTACTGATAAGAGCGATGTTTATAGTTTTGGAGTAGTGCTTGTCGAACTTTTAACCGGACAGAAGGCAATATCGTCGATAAGATCGGACGAAGTGAGGGGTCTAGCTTCGTTTTTTGTTGTGTGTATGGAAGAGAATCAGGTATTTGACATTGTTGACAAAAGAGTGTTGAAGGAGGGAGAGAAAGAACATATAATTGCAGTGGCTAATCTTGCATATAGATGTTTAGAGTTGAATGGGAGAAAAAGGCCAAATATGAAAGAAGTTACCTTGGAATTAGAAGAGATTAGAAGATTGGATTATTGGAAGGGTGGTTCGGCACAAGAAAACTTTGAAGAAATTGAGCTTGATAGAAATGAAGACAGTCAACTATGGGATGGATATTCATATTCTAATGTGTCAGAAACATTGCACACTACTACAAGTAGCAGCAGGGAACTCTCCGAGATTATGCCTATTCTTACAATCAAATAA 2031 0.3944 MILQSAFHYYSHIIILMIISIYPLLLACAKDPTIAKPGCVSTCGNVDIAYPFGMNDSNCYAHQFFEIECKNHKPYLASFNLEVTQIYVNISTVEIKNPIYYSCQSKNAFINLKGSPYVYSQEYDKFMAIGCNKLGFLRSNGSTVGGCVSICDDDEAVGNVEFGNDGCHGRYCCETSLPMHVWEYNATIRDIGDGSESNMCSYAMIVSDAWLQSYGLGIQKLSNVENMIDVPAVLEWEIRCRCLDGYDGNPYIQGGCNAVASGKENGSKWAIVGVSSSLGSVILLLGGWLLYKLIKKRIIKKRKEKFFKKNGGLLLKQKLSSGEENVDKVVLFTLKELENATDNFNLNRVLGKGGQGTVYKGMLVDGKIVAVKKFKVQGNTAEFINEFVVLNQINHRNVVKLLGCCLEDEVPLLVYEFIPNGNLYEHLHEQNEDLPMTWDMRLRIASEIAGALFYLHSIASQPIYHRDIKSTNILLDEKYRAKVADFGTSRIVSAEATHLTTVVQGTFGYLDPEYFQTSQFTDKSDVYSFGVVLVELLTGQKAISSIRSDEVRGLASFFVVCMEENQVFDIVDKRVLKEGEKEHIIAVANLAYRCLELNGRKRPNMKEVTLELEEIRRLDYWKGGSAQENFEEIELDRNEDSQLWDGYSYSNVSETLHTTTSSSRELSEIMPILTIK 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01088 676 SUPERFAMILY Protein kinase-like (PK-like) 325 612 IPR011009 -
Arst4g01088 676 FunFam Wall-associated receptor kinase 2 314 417 - -
Arst4g01088 676 SMART serkin_6 344 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g01088 676 Pfam Wall-associated receptor kinase galacturonan-binding 39 95 IPR025287 GO:0030247
Arst4g01088 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Arst4g01088 676 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 32 626 IPR045274 GO:0007166
Arst4g01088 676 Gene3D Phosphorylase Kinase; domain 1 316 417 - -
Arst4g01088 676 FunFam Wall-associated receptor kinase 2 418 635 - -
Arst4g01088 676 ProSiteProfiles Protein kinase domain profile. 344 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g01088 676 Gene3D Transferase(Phosphotransferase) domain 1 418 636 - -
Arst4g01088 676 Pfam Protein kinase domain 345 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g01088 676 CDD STKc_IRAK 350 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01088 Arst-Chr4 9577358 9581233 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01088 31 671 Receptor kinase-like Gene Family AT1G79680 40.903 1.39e-175 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Arst4g01088 Pkinase 5.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01088 - - gmx:100798794 783.482