Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01087 ATGATTCTTCAATCTGCATTTCACTACTATTCACATATCATCATTTTGATGATAATATCCATATATCCATTGTTATTGGCATGTGCAAAAGATCCCACCATAGCAAAACCTGGTTGTGTTTCCACATGTGGGAACGTTGACATCGCTTACCCTTTTGGTATGAACGACTCCAATTGCTATGCTCACCAATTTTTCGAGATAGAGTGCAAAAATCACAAGCCTTACCTTGCATCATTCAATCTTGAGGTCACACAAATTTATGTAAACATTAGTACGGTGGAGATCAAGAACCCAATCTACTATAGCTGCCAAAGCAAAAACGCTTTCATAAACCTAAAAGGAAGCCCCTACGTGTATTCCCAAGAATACGACAAATTCATGGCCATTGGTTGCAACAAACTAGGGTTCTTGCGTTCCAACGGTTCAACGGTTGGCGGTTGCGTGTCCATCTGCGACGACGACGAAGCGGTTGGAAATGTTGAATTCGGGAACGACGGTTGCCATGGGAGATACTGCTGTGAGACTTCACTGCCTATGCATGTTTGGGAGTACAACGCAACAATAAGGGATATTGGAGATGGAAGTGAGAGCAACATGTGTAGCTATGCAATGATTGTGAGTGATGCTTGGCTTCAGAGTTATGGCTTGGGGATTCAGAAACTTAGTAACGTAGAGAACATGATTGATGTTCCTGCTGTTCTTGAGTGGGAGATTCGGTATGATATGGGGATCAATAATTCAATACTGTCTTCTTCTTCTCATGCTCGTTGTGACGCTTCGAGTCTTGCGTCTCCAACCAACACTACCTCTGGTTTTAGGTGTCGCTGCTTGGATGGTTACGATGGCAATCCCTACATTCAAGGGGGTTGCAACGCTGTGGCATCCGGTAAAGAAAACGGATCCAAGTGGGCTATAGTAGGAGTTTCATCAAGTCTTGGGTCAGTCATTTTACTCCTTGGTGGATGGTTGTTATACAAACTTATAAAGAAGAGAATAATAAAGAAACGCAAGGAAAAGTTCTTCAAGAAAAATGGAGGTTTGTTGTTAAAACAAAAGTTGTCTTCCGGCGAAGAAAATGTTGACAAAGTTGTTCTCTTCACCTTAAAAGAATTAGAAAATGCCACTGATAACTTCAATCTAAACAGAGTTCTTGGAAAAGGAGGCCAAGGTACCGTTTACAAGGGCATGCTAGTAGATGGCAAAATCGTTGCAGTGAAAAAGTTCAAAGTCCAAGGAAACACTGCAGAATTCATCAATGAATTCGTTGTTCTTAATCAAATTAACCATAGAAATGTGGTTAAGTTATTAGGGTGTTGTTTGGAGGATGAAGTTCCTTTGCTCGTTTATGAGTTTATTCCCAATGGTAACCTTTATGAACATCTTCATGAACAAAATGAGGATTTACCAATGACATGGGACATGAGATTGAGAATTGCCAGTGAGATTGCAGGAGCACTTTTTTACTTACACTCTATTGCTTCTCAACCCATTTATCATAGAGATATCAAATCAACAAATATACTTTTGGATGAAAAGTACAGGGCAAAAGTGGCAGATTTTGGAACCTCTAGAATAGTTTCTGCTGAAGCTACTCATCTCACTACGGTAGTTCAAGGAACTTTTGGTTATTTAGATCCTGAATACTTTCAAACTAGTCAGTTTACTGATAAGAGCGATGTTTATAGTTTTGGAGTAGTGCTTGTCGAACTTTTAACCGGACAGAAGGCAATATCGTCGATAAGATCGGACGAAGTGAGGGGTCTAGCTTCGTTTTTTGTTGTGTGTATGGAAGAGAATCAGGTATTTGACATTGTTGACAAAAGAGTGTTGAAGGAGGGAGAGAAAGAACATATAATTGCAGTGGCTAATCTTGCATATAGATGTTTAGAGTTGAATGGGAGAAAAAGGCCAAATATGAAAGAAGTTACCTTGGAATTAGAAGAGATTAGAAGATTGGATTATTGGAAGGGTGGTTCGGCACAAGAAAACTTTGAAGAAATTGAGCTTGATAGAAATGAAGACAGTCAACTATGGGATGGATATTCATATTCTAATGTGTCAGAAACATTGCACACTACTACAAGTAGCAGCAGGGAACTCTCCGAGATTATGCCTATTCTTACAATCAAATAA 2133 0.3962 MILQSAFHYYSHIIILMIISIYPLLLACAKDPTIAKPGCVSTCGNVDIAYPFGMNDSNCYAHQFFEIECKNHKPYLASFNLEVTQIYVNISTVEIKNPIYYSCQSKNAFINLKGSPYVYSQEYDKFMAIGCNKLGFLRSNGSTVGGCVSICDDDEAVGNVEFGNDGCHGRYCCETSLPMHVWEYNATIRDIGDGSESNMCSYAMIVSDAWLQSYGLGIQKLSNVENMIDVPAVLEWEIRYDMGINNSILSSSSHARCDASSLASPTNTTSGFRCRCLDGYDGNPYIQGGCNAVASGKENGSKWAIVGVSSSLGSVILLLGGWLLYKLIKKRIIKKRKEKFFKKNGGLLLKQKLSSGEENVDKVVLFTLKELENATDNFNLNRVLGKGGQGTVYKGMLVDGKIVAVKKFKVQGNTAEFINEFVVLNQINHRNVVKLLGCCLEDEVPLLVYEFIPNGNLYEHLHEQNEDLPMTWDMRLRIASEIAGALFYLHSIASQPIYHRDIKSTNILLDEKYRAKVADFGTSRIVSAEATHLTTVVQGTFGYLDPEYFQTSQFTDKSDVYSFGVVLVELLTGQKAISSIRSDEVRGLASFFVVCMEENQVFDIVDKRVLKEGEKEHIIAVANLAYRCLELNGRKRPNMKEVTLELEEIRRLDYWKGGSAQENFEEIELDRNEDSQLWDGYSYSNVSETLHTTTSSSRELSEIMPILTIK 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01087 710 CDD STKc_IRAK 384 649 - -
Arst4g01087 710 Gene3D Transferase(Phosphotransferase) domain 1 452 669 - -
Arst4g01087 710 ProSiteProfiles Protein kinase domain profile. 378 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g01087 710 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 32 660 IPR045274 GO:0007166
Arst4g01087 710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 497 509 IPR008271 GO:0004672|GO:0006468
Arst4g01087 710 FunFam Wall-associated receptor kinase 2 452 669 - -
Arst4g01087 710 SUPERFAMILY Protein kinase-like (PK-like) 359 646 IPR011009 -
Arst4g01087 710 SMART serkin_6 378 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g01087 710 Gene3D Phosphorylase Kinase; domain 1 350 451 - -
Arst4g01087 710 Pfam Protein kinase domain 379 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g01087 710 Pfam Wall-associated receptor kinase galacturonan-binding 39 95 IPR025287 GO:0030247
Arst4g01087 710 FunFam Wall-associated receptor kinase 2 348 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01087 Arst-Chr4 9577358 9581233 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01087 31 705 Receptor kinase-like Gene Family AT1G79680 41.787 7.83e-180 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Arst4g01087 Pkinase 6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01087 - - gmx:100798794 814.683