LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst4g01050	ATGTGGAGGGTTCTTGGGGTAGGACACTCTTATTTACTGATTCTGATGATGTTAGTCTCAGTGAGATTGAGCATTGTTGAGGCTCAAAAAAAGTCCTTTCTCATAAATTGTGGTTCAAACTCTTCTGTGAATGTGGATGGTAGAAGATGGGTTGGGGATATGAACCCTAATAATAATGTCACTCTTAGTTCCCCTGGTGTTGCAGTATCCACCTCTCCATTGAGTGGAATTTCTATCTATGATTCACTCTACAAAACAGCCAGGATTTTCACTGGTTCTTTGAATTACACAATCAAAGATCTTCAAGGGAACTATGTTCTTAGGTTCCATTTTTCTCCCTTTGTGGATGTTGAGGACTACAATGTGAATAAGTCCTCATTTAGTGTGGTGGCTAATAGTCTGAAACTACTCTCTGAGTTCAATGTTCCGGAGAAGATTTCGCAGTTGCAGAATTCAGGAAAGAATTCTAGTTCATTCTCCTTGATTAAGGAGTACCTTTTTGATATCAGTGCAGAGCTTGTGATTGAGTTTGTTTCAACTGGAAACTCCTTTGGATTTGTCAATGCCATTGAAGTTGTCCCAGTTGTGGACGAGCTCTTTGCCAGCTCAGTCAGGAAAGTTGGTGGTGGAAACTTGAATGTGATGGGACGTGGAATGGAGACTATGTATAGATTAAATGTTGGTGGTCCTGAGATTCAACCTGATCAAGATCCTGATCTTTGGAGAACTTGGGAAATGGATTCTGGCTATATGATCACACAAAATGCTGGCATAGGAATTAACAACAGTTCCAATATCACTTATGCTTCTGCAAATGATACTTCAGTAGCTCCTCTACTTGTATACGAAACAGCAAGGGCAATGTCAAACACAGAAGTCTTGGACAAGAGATTTAACATGTCCTGGAAATTCGAAGTGGATCCCGATTTTGATTATTTGGTCCGGCTACATTTCTGCGAGTTGGTTTATGATAAGGCGAACGAGAGGATTTTCAAGATCTACATAAACAACAGGACTGCTGCAGATAATGTTGATGTTTATGTTCAAGCAGGAGGGAAGAATAAAGCATATCACCTGGACTATTTCGACGCCATGTCTTTGAGCATTGACACATTATGGGTTCAACTAGGTCCTGATGCAGGTGCTGGTGCTGCGGGAACTGATGCTCTCTTGAATGGACTAGAGATTTTCAAGCTTAGTCGAAATGGGAATCTAGCCTATGTCGATAAACATGACTCAGCTGGCAATGCAGCAAGCAAATCAAAAGTTCTTTGGGTTGGAATTGGAGCAGGTCTAGCTTCTATTGCTGTAATTGCAGTTATAGTTATTCTTGTTTTCTGTTTCTGCAGAAGCCAGAAGAACAAATCAAGTGACACGAAAAACAATTCTCCTGGTTGGCGACCTTTGTTCCTTGTTGGGGCGGCTGTGAACAGCACCATGGCCGCGAAGGGATCATCAGGAAGTCAAAAAGCATATGGATCTGTGATCTCAACAAGAGCTGGCAAGCACTTTACATTGGCTGAAATCATTGCTGCCACAAAAAATTTTGATGAGAGCTTGGTAATTGGAGTTGGAGGCTTTGGTAAGGTGTACAAGGGGGAGATTGATGGTGGTGTCCTTGCTGCGATCAAGCGATCCAACCCGCAATCTGAGCAAGGCTTGGCTGAATTTGAGACAGAAATTGAGATGCTCTCCAAACTCAGGCATAGGCATCTTGTGTCATTGATTGGTTTCTGTGAAGAAAAAAATGAAATGATTCTGGTTTATGAGTATATGTCCAATGGAACTCTTAGAAGCCACTTGTTTGGGAGTGATCTTCCCCCATTAACTTGGAAGCAGCGTCTCGAGGTGTGCATTGGCGCTGCTAGGGGACTTCACTACCTACATACAGGAGCCGAGCGTGGTATAATTCACAGGGATGTCAAGACAACCAACATATTGCTGGATGAGAACTTTGTAGCCAAAATGGCCGATTTTGGTTTGTCGAAAGATGGACCGGCTTTGGACCATACTCATGTTAGTACAGCTGTGAAGGGAAGCTTTGGCTATCTAGACCCGGAGTACTTCAGGAGACAGCAGTTGACCGAGAAATCGGATGTGTACTCATTTGGGGTTGTGTTGTTTGAAGTTGTTTGTGCTAGAGCTGTGATCAACCCAACCTTGCCTAAAGATCAGATCAATCTTGCAGAATGGGCAATGAGATGGCAAAGGCAAAGATCAATTGAAACAATCATTGATCCTCATCTTAGAGGAAACTATTGTCCCGAATCCTTGGCGAAGTTTGGGGAGATAGCCGAGAAATGTCTCGCGGACGATGGGAAGAGCAGGCCAACTATGGGGGAGGTGTTGTGGCACTTAGAATATGTGTTGCAGCTACATGAAGCTTGGTTGAACAGGGACAGTATTGTAACTTCCTTCTCAAGTAGCCAAGATTTGAGAGGTGCAAAAGATGGAGGACTAGAATTGGTGCACGAGTCTTCAAGTCAAGATGAAGAAAATGAATGA	2505	0.4291	MWRVLGVGHSYLLILMMLVSVRLSIVEAQKKSFLINCGSNSSVNVDGRRWVGDMNPNNNVTLSSPGVAVSTSPLSGISIYDSLYKTARIFTGSLNYTIKDLQGNYVLRFHFSPFVDVEDYNVNKSSFSVVANSLKLLSEFNVPEKISQLQNSGKNSSSFSLIKEYLFDISAELVIEFVSTGNSFGFVNAIEVVPVVDELFASSVRKVGGGNLNVMGRGMETMYRLNVGGPEIQPDQDPDLWRTWEMDSGYMITQNAGIGINNSSNITYASANDTSVAPLLVYETARAMSNTEVLDKRFNMSWKFEVDPDFDYLVRLHFCELVYDKANERIFKIYINNRTAADNVDVYVQAGGKNKAYHLDYFDAMSLSIDTLWVQLGPDAGAGAAGTDALLNGLEIFKLSRNGNLAYVDKHDSAGNAASKSKVLWVGIGAGLASIAVIAVIVILVFCFCRSQKNKSSDTKNNSPGWRPLFLVGAAVNSTMAAKGSSGSQKAYGSVISTRAGKHFTLAEIIAATKNFDESLVIGVGGFGKVYKGEIDGGVLAAIKRSNPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCEEKNEMILVYEYMSNGTLRSHLFGSDLPPLTWKQRLEVCIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMADFGLSKDGPALDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVVCARAVINPTLPKDQINLAEWAMRWQRQRSIETIIDPHLRGNYCPESLAKFGEIAEKCLADDGKSRPTMGEVLWHLEYVLQLHEAWLNRDSIVTSFSSSQDLRGAKDGGLELVHESSSQDEENE	834

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst4g01050	834	Pfam	Protein tyrosine and serine/threonine kinase	521	783	IPR001245	GO:0004672\|GO:0006468
	Arst4g01050	834	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	636	648	IPR008271	GO:0004672\|GO:0006468
	Arst4g01050	834	CDD	STKc_IRAK	522	787	-	-
	Arst4g01050	834	ProSiteProfiles	Protein kinase domain profile.	516	788	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst4g01050	834	FunFam	Receptor-like protein kinase FERONIA	592	805	-	-
	Arst4g01050	834	PANTHER	OS07G0166700 PROTEIN	502	793	IPR045272	GO:0004714\|GO:0006468
	Arst4g01050	834	MobiDBLite	consensus disorder prediction	817	834	-	-
	Arst4g01050	834	FunFam	Receptor-like protein kinase FERONIA	218	401	-	-
	Arst4g01050	834	FunFam	receptor-like protein kinase FERONIA	479	591	-	-
	Arst4g01050	834	MobiDBLite	consensus disorder prediction	810	834	-	-
	Arst4g01050	834	ProSitePatterns	Protein kinases ATP-binding region signature.	522	544	IPR017441	GO:0005524
	Arst4g01050	834	Gene3D	Transferase(Phosphotransferase) domain 1	592	805	-	-
	Arst4g01050	834	Gene3D	Phosphorylase Kinase; domain 1	476	591	-	-
	Arst4g01050	834	SMART	serkin_6	516	789	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst4g01050	834	Pfam	Malectin-like domain	35	398	IPR024788	-
	Arst4g01050	834	Gene3D	-	28	195	-	-
	Arst4g01050	834	Gene3D	-	218	400	-	-
	Arst4g01050	834	SUPERFAMILY	Protein kinase-like (PK-like)	493	788	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst4g01050	Arst-Chr4	9101771	9105240	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst4g01050	11	817	Receptor kinase-like Gene Family	AT1G30570	64.137	0.0	1086

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Arst4g01050		Malectin_like	9.9e-33	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst4g01050	-		-	gmx:100791403	1307.74