Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01026 ATGACTTCCACCCATGACGTTACAGATAATGAAGCTGGTGAGAAAGAGCAGTCAGAATCACAGATGCAATCTTTATCTGCAAATGGAATTTCTGATCCAGGTGCTGGTATGCAGAATAATCAGTATGTAACACCTGCACCACTTGGAACTGGGTATGCTATGGCGCCCCCTCCTTATCCATATCCAGATCCTTACTACAGAAGCGTGTTTGCTCCGAATGATACACAGCCATATCCCCCGCAGCCATATGGTGGACATCCAATGGCCCATATTCAGTTAATGGGAATTCAGCAAGCTGGTGTTCCTTTGCCGACTAATGCAATTGAGGAGCCTGTGTTTGTAAATGCAAAGCAGTATCACGGTATCTTAAGACGTAGGCAATCCCGTGCTAAAGCTGAATCCGAAAATAAGGCTATCAGGAATCGCAAGCCATACCTGCATGAATCTCGACATCAGCATGCACTTCGACGAGCAAGAGGATGTGGAGGTCGATTTCTGAACTCAAAGAAAGATGAGAATCAACAGGATGAGCTGTCACCTGCTGACAAATCACACTCAAACGACAATCACAATCCTGACAAAAACAATCTTGCACCATCAGATAGAGCATCCTAA 615 0.4504 MTSTHDVTDNEAGEKEQSESQMQSLSANGISDPGAGMQNNQYVTPAPLGTGYAMAPPPYPYPDPYYRSVFAPNDTQPYPPQPYGGHPMAHIQLMGIQQAGVPLPTNAIEEPVFVNAKQYHGILRRRQSRAKAESENKAIRNRKPYLHESRHQHALRRARGCGGRFLNSKKDENQQDELSPADKSHSNDNHNPDKNNLAPSDRAS 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01026 204 PRINTS CCAAT-binding transcription factor subunit B signature 111 133 IPR001289 GO:0003700|GO:0006355
Arst4g01026 204 PRINTS CCAAT-binding transcription factor subunit B signature 142 165 IPR001289 GO:0003700|GO:0006355
Arst4g01026 204 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 10 195 IPR001289 GO:0003700|GO:0006355
Arst4g01026 204 MobiDBLite consensus disorder prediction 164 190 - -
Arst4g01026 204 SMART cbf3 107 168 IPR001289 GO:0003700|GO:0006355
Arst4g01026 204 MobiDBLite consensus disorder prediction 128 145 - -
Arst4g01026 204 ProSitePatterns NF-YA/HAP2 subunit signature. 113 133 IPR018362 GO:0003677|GO:0016602
Arst4g01026 204 MobiDBLite consensus disorder prediction 128 204 - -
Arst4g01026 204 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 110 165 IPR001289 GO:0003700|GO:0006355
Arst4g01026 204 MobiDBLite consensus disorder prediction 1 57 - -
Arst4g01026 204 MobiDBLite consensus disorder prediction 17 46 - -
Arst4g01026 204 Gene3D - 108 169 - -
Arst4g01026 204 ProSiteProfiles NF-YA/HAP2 family profile. 108 168 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01026 Arst-Chr4 8857881 8861435 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01026 2 184 CCAAT-HAP2 Transcription Factor Family AT1G30500 53.968 5.12e-64 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Arst4g01026 CBFB_NFYA 4.8e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01026 K08064 - gmx:100809036 323.168