Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01025 ATGGCACTTTCTATGCACAAGGACGCGTCAAATAGCATGGATTCAAGCAAGTACGTGAGGTACACACCTGAACAAGTTGAGGCTTTGGAAAGGGTCTATGCTGAATGTCCAAAGCCTTCTTCTTTGAGAAGACAACAACTCATCAGAGAGTGCCCAATCCTCTCAAACATTGAGCCTAAACAGATCAAAGTCTGGTTCCAGAACCGAAGATGCCGTGAGAAGCAAAGGAAAGAAGCCTCTCGCCTGCAGACAGTGAATAGAAAGCTGACTGCAATGAACAAGCTGTTGATGGAGGAGAATGACCGGTTGCAGAAGCAGGTCTCCCATTTGGTCTATGAAAATGGATATATGAAGCAACAAATTCATACTGCATCTGCTACTACTACCACAGACAATAGCTGTGAGTCTGTTGTGATGAGTGGTCAGAACCAACAACAGCAAAACCCAACACCTCAGCATCCTCAAAGGGATGCTAACAACCCAGCTGGTCTTCTCGCCATAGCTGAGGAGACCCTGGCAGAGTTCCTTTCCAAGGCTACTGGAACTGCTGTCGACTGGGTCCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGAATTGTTGCTGTTTCCCGCAACTGTAGCGGTGTGGCAGCACGAGCCTGCGGCCTTGTGAGTCTAGAACCCACAAAGGTTGCTGAGATTCTCAAAGATCGACCATCATGGTACCGCGACTGTCGGTGCCTTGATGTGTTGAGCATTGTTCCTACAGGGAGTGGGGGCACTATAGAGCTCATATATATGCAGACTTACGCGCCAACTACTTTGGCAGCAGCGCGCGACTTCTGGACAGTAAGATACACTACAAGTTTGGAAGATGGAAGTCTTGTGATTTGTGAGAGATCATTGACATCTTCGACCGGCGGCCCTACAGGGCCTCCTTCTTCAAACTTTGTAAGAGCTGAGATGCTTCCCAGTGGTTATCTAATTAGACCCTGCGAGGGTGGTGGCTCCATTATTCATATTGTAGACCATGTTGATTTAGATGTCTGGAGTGTTCCTGAAGTACTGAGGCCGCTTTACGAATCTTCAAAAATCTTGGCCCAGAAATTGACCATTGCAGCCCTGCAACATATAAGACAGATTGCACAAGAATCTAGCGGAGAAATTCAGTATGGTGGGGGACGCCAGCCTGCTGTGTTGAGGACATTTAGCCAGAGACTCTGCCGGGGGTTCAATGATGCTGTTAATGGGTTTGTGGAGGATGGTTGGTCACTGCTGGGCAATGATGGGGTAGAAGATGTGACTATAGCTATAAACTCATCTCCCAACAAATTTTTGGGGTCCCAGTACAATTCATCAATGTTCCCAGCTTTTGGAGGTGGGGTTCTGTGTGCCAAGGCATCCATGCTGTTGCAGAATGTTCCTCCGGCCTTGCTTGTTCGATTCTTGAGGGAGCATCGGTCTGAGTGGGCTGATTATGGTGTTGATGCATACTCTGCTGCATGTCTTAAGGCTACTCCCTATGCTGTTCCTTGTGCAAGACCTGGTGGTTTCCCAAGCACCCAGGTCATTTTACCACTTGCTCATACTATTGAGCATGAGGAGTTCTTGGAGGTAGTTCGGATAGAGGGTCATGCATTTTCCCCTGAAGATGTTGCATTGGCACGCGATATGTATTTGCTTCAGCTTTGCAGTGGGGTTGATGAAAATGCAATTGGAGCTTGTGCTCAATTGGTATTTGCACCTATTGATGAATCATTTGCTGATGATGCTCTTCTACTTCCTTCTGGATTCCGCGTCATACCATTGGATCCTAAAACAGATACTCCAACCACAACAAGGACATTAGATTTGGCATCCACACTTGAAGTAGGTTCTGGGAATACACGTGCAGCCGGAGAAGCCGATGATTACAATCTTCGGTCAGTCCTAACCATTGCATTTCAATTCACCTTTGAGAACCATTTGCGCGACAATGTAGCTGCCATGGCTCGCCAGTATGTGCGTAGTGTTGTGGGGTCGGTTCAGAGGGTTGCAATGGCAATTGCTCCATCACGGCTCAGTACTCAACTGGGGCCAAAGTCTCTCCCTGGTTCACCGGAGGCTCTTACTTTAGCAAGATGGATCAGCCGAAGCTACCGAGTCCACACTGGTTCAGACCTTTTTCGGGTTGAATCAACTGCTGGTGATGCAATCTTGAAGCAACTTTGGCAACATTCTGATGCAATCATGTGCTGTTCTGTGAAAACAAATGCATCTCCAGTATTCACCTTTGCAAACCAAGCGGGACTTGACATGCTCGAAACTACTCTTGTCGCCCTTCAAGACATTATGCTCGATAAAGTTCTTGATGAATCTGGCAGGAAGATTCTTTGCTCTGAGTTCTCCAAGATTATGCAACAGGTAATTAACAAATAA 2403 0.4719 MALSMHKDASNSMDSSKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYMKQQIHTASATTTTDNSCESVVMSGQNQQQQNPTPQHPQRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCLDVLSIVPTGSGGTIELIYMQTYAPTTLAAARDFWTVRYTTSLEDGSLVICERSLTSSTGGPTGPPSSNFVRAEMLPSGYLIRPCEGGGSIIHIVDHVDLDVWSVPEVLRPLYESSKILAQKLTIAALQHIRQIAQESSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVEDGWSLLGNDGVEDVTIAINSSPNKFLGSQYNSSMFPAFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSAACLKATPYAVPCARPGGFPSTQVILPLAHTIEHEEFLEVVRIEGHAFSPEDVALARDMYLLQLCSGVDENAIGACAQLVFAPIDESFADDALLLPSGFRVIPLDPKTDTPTTTRTLDLASTLEVGSGNTRAAGEADDYNLRSVLTIAFQFTFENHLRDNVAAMARQYVRSVVGSVQRVAMAIAPSRLSTQLGPKSLPGSPEALTLARWISRSYRVHTGSDLFRVESTAGDAILKQLWQHSDAIMCCSVKTNASPVFTFANQAGLDMLETTLVALQDIMLDKVLDESGRKILCSEFSKIMQQVINK 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01025 800 FunFam Homeobox-leucine zipper protein REVOLUTA 17 72 - -
Arst4g01025 800 SMART START_1 166 376 IPR002913 GO:0008289
Arst4g01025 800 MobiDBLite consensus disorder prediction 132 157 - -
Arst4g01025 800 Gene3D - 185 378 IPR023393 -
Arst4g01025 800 SUPERFAMILY Bet v1-like 415 601 - -
Arst4g01025 800 Pfam START domain 167 374 IPR002913 GO:0008289
Arst4g01025 800 Gene3D - 8 83 - -
Arst4g01025 800 FunFam homeobox-leucine zipper protein ATHB-15 202 383 - -
Arst4g01025 800 SUPERFAMILY Homeodomain-like 17 79 IPR009057 -
Arst4g01025 800 SMART HOX_1 14 80 IPR001356 GO:0003677
Arst4g01025 800 ProSiteProfiles START domain profile. 157 358 IPR002913 GO:0008289
Arst4g01025 800 CDD homeodomain 17 77 IPR001356 GO:0003677
Arst4g01025 800 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 13 796 IPR044830 GO:0003700
Arst4g01025 800 SUPERFAMILY Bet v1-like 167 378 - -
Arst4g01025 800 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 13 796 IPR044830 GO:0003700
Arst4g01025 800 Coils Coil 86 106 - -
Arst4g01025 800 MobiDBLite consensus disorder prediction 132 159 - -
Arst4g01025 800 Pfam MEKHLA domain 699 796 IPR013978 -
Arst4g01025 800 CDD bZIP 69 108 - -
Arst4g01025 800 Pfam Homeodomain 17 75 IPR001356 GO:0003677
Arst4g01025 800 CDD START_ArGLABRA2_like 161 377 - -
Arst4g01025 800 ProSiteProfiles 'Homeobox' domain profile. 12 76 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01025 Arst-Chr4 8828855 8833915 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g01025 1 796 Homeobox Transcription Factor Family AT2G34710 80.693 0.0 1325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Arst4g01025 START 1.8e-52 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g01025 K09338 - gmx:100779499 1459.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g01025 4 8828855 8833915 Arst4g01025 4 8828855 8833915 ECH