Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00992 ATGGAGGATTCCGAGGGAGTCCTCAGCTTCGATTTCGAGGGCGGCCTCGACGCTGCTCCCCCCGCTGCCGCCGCCGTCTCCGCACCCTCCGCCGGACTTCTCTCCAATCAAAACGATTCAACCGCGGCGGCCGCTGCAGCCGCGGTTCCCAATGGCGCTGCCGCAGCTGCGCCCACTGCTGGAGACCCCGGAGCTGCCGGAAATGTGCCCGGGAGGCGGAGCTTCCGGCAGACGGTGTGCCGGCACTGGCTAAGGAGCTTGTGTATGAAGGGAGACGCGTGCGGGTTCTTGCATCAGTACGACAAGGCGAGGATGCCGGTGTGCCGGTTCTTTCGGCTGTACGGTGAGTGCCGCGAGCAGGATTGCGTGTACAAGCACACCAACGAAGATATCAAGGAGTGTAACATGTACAAGTTAGGATTTTGTCCTAATGGACCTGATTGCCGATACAGACATGCTAAATCTGCTGGACCTCCACCTTCTGTTGATGAGGTCCTTCAAAAGATCCAGCATTTATATTCTTACAACTACAATGCATCGAACAAGTTTTTCCAACAAAGGGGTTCAAACTATAATCAACAAGCTGAAAAATCTCAATTTCCTCAAGGAAATAATTCTACAAACCAAGCTGTTGCTGGAAAACCATTACAAGCAGAGTCGGGTAATGTCCAGCAGCAACAAGTTCAACAGGCTCAGCAGCCAGTCAATCAAAGCCAAGTGCAAAATGTTGCTAGTGGTCAGCCCAATCAGGCGAATAAAACTGCAACTCCTTTACCTCAAGGAATATCTAGGTATTTTATTGTTAAAAGTTGCAATCGTGAAAATTTGGAGTTATCAGTACAACAAGGAGTATGGGCAACACAAAGGAGCAACGAGTCAAAACTAAACGAGGCTTTTGATTCTGTGGAAAATGTTATACTGATTTTCTCAGTCAACCGAACTCGCCATTTCCAGGGTTGTGCAAAGATGACCTCCAGAATTGGTGGTTCTGTTGCTGGGGGAAACTGGAAATATGCTCATGGAACTGCACATTATGGGCGGAATTTCTCTGTTAAATGGTTGAAGTTATGTGAACTGTCATTCCACAAAACTCGCCATTTGAGGAATCCATACAATTGGAGAAACATTCTGTTCATGTAATTGCAGATAAGTAGAGATTGTCAGGAGCTGGAACCCTCCATCGGTGAGCAGTTGGCATCCTTGCTTTATCTTGAGCCAGATAGTGAGCTTATGGCTATCTCAATTGCAGCAGAGTCTAAACGAGAAGAAGAGAAGGCAAAGGGAGTGAATCCAGACAATGGAGGAGAGAATCCGGATATCGTCCCATTTGAAGACAACGAAGAAGAGGAAGAGGAAGAAAGTGATGAAGAGGAGGAGAGCTTTGGTCATGTTGTTGGGCCAGCTGTTCAAGGCAGAGGTAGGGGCAGAGGCATGATGTGGCCGCCTCACATGCCTCTTGCACGCGGAGCCAGACCTATGCCTGGAATGCCAGGTTTTAACCCAGTAATGATGGGTGATGGATTATCATATGGGCCTGTTGGACCTGATGGCTTCGGTATGCCCGATCTTTTTGGTGTGGGCCCTCGTGGTTTTCCTCCATATGGTCCTAGGTTCTCTGGTGATTTTGCAGGACCCCCTGCAGCCATGATGTTCCGTGGGCGACCTTCCCAACCTGGGATGTTTCCAGGTGGTGGATTTGGGATGATGATGAATCCTGCACGTCCTCCCTTTATGGGGGGGATGGGCGCAAATCCTCCAAGAGCCAGTAGGCCAGTTAATATGCCTCCGATGTTTCCACCGCCACCACCTCCACCTCAAAATCACAACCGACTTGTAAAGAGGGATCAAAGAATTAATGATCGGAATGATAAATTTGGTTCAGGATTAGAGCAGGGCAAGAATCAGGATATGATGAGTCAAAGTGGTGGACCTGATGAAGACATGCAAGGATACAAAGCACAGCAGGATGATCAGTATGCTGTCAACACCTTCAGGAACGATGATAGTGAAAGCGAGGATGAGGCACCTCGGCGGTCAAGGCATGGAGAGGGGAAAAAGAGAAGGCGAAGCTTAGAAGATGCCAATGCAAGCTCTAATCACTAG 2103 0.4922 MEDSEGVLSFDFEGGLDAAPPAAAAVSAPSAGLLSNQNDSTAAAAAAAVPNGAAAAAPTAGDPGAAGNVPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKSAGPPPSVDEVLQKIQHLYSYNYNASNKFFQQRGSNYNQQAEKSQFPQGNNSTNQAVAGKPLQAESGNVQQQQVQQAQQPVNQSQVQNVASGQPNQANKTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSVENVILIFSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNWRNILFMXLQISRDCQELEPSIGEQLASLLYLEPDSELMAISIAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESDEEEESFGHVVGPAVQGRGRGRGMMWPPHMPLARGARPMPGMPGFNPVMMGDGLSYGPVGPDGFGMPDLFGVGPRGFPPYGPRFSGDFAGPPAAMMFRGRPSQPGMFPGGGFGMMMNPARPPFMGGMGANPPRASRPVNMPPMFPPPPPPPQNHNRLVKRDQRINDRNDKFGSGLEQGKNQDMMSQSGGPDEDMQGYKAQQDDQYAVNTFRNDDSESEDEAPRRSRHGEGKKRRRSLEDANASSNH 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00992 700 SUPERFAMILY CCCH zinc finger 74 105 IPR036855 GO:0046872
Arst4g00992 700 MobiDBLite consensus disorder prediction 577 700 - -
Arst4g00992 700 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 41 683 IPR045168 -
Arst4g00992 700 MobiDBLite consensus disorder prediction 628 642 - -
Arst4g00992 700 CDD YTH 264 402 IPR007275 GO:0003723
Arst4g00992 700 ProSiteProfiles YTH domain profile. 263 402 IPR007275 GO:0003723
Arst4g00992 700 MobiDBLite consensus disorder prediction 666 694 - -
Arst4g00992 700 ProSiteProfiles Zinc finger C3H1-type profile. 74 101 IPR000571 GO:0046872
Arst4g00992 700 Pfam YT521-B-like domain 263 401 IPR007275 GO:0003723
Arst4g00992 700 SMART c3hfinal6 130 154 IPR000571 GO:0046872
Arst4g00992 700 SMART c3hfinal6 74 100 IPR000571 GO:0046872
Arst4g00992 700 SMART c3hfinal6 102 128 IPR000571 GO:0046872
Arst4g00992 700 Gene3D - 70 133 - -
Arst4g00992 700 FunFam Cleavage and polyadenylation specificity factor 30 kDa subunit 69 130 - -
Arst4g00992 700 MobiDBLite consensus disorder prediction 422 480 - -
Arst4g00992 700 MobiDBLite consensus disorder prediction 186 256 - -
Arst4g00992 700 Gene3D ph1033 like domains 220 406 - -
Arst4g00992 700 MobiDBLite consensus disorder prediction 441 459 - -
Arst4g00992 700 MobiDBLite consensus disorder prediction 589 608 - -
Arst4g00992 700 ProSiteProfiles Zinc finger C3H1-type profile. 128 155 IPR000571 GO:0046872
Arst4g00992 700 MobiDBLite consensus disorder prediction 610 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00992 Arst-Chr4 8154255 8161518 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Arst4g00992 YTH 2.2e-39 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00992 K14404 - gmx:100802826 1083.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g00992 4 8154255 8161518 Arst4g00992 4 8154255 8161518 ECH