Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00987 ATGGAGAATGCTTCTTGGTTCTTTCTCATTCTTATCTTATCATCATGCCATCATTTCATGGCTTCCTCAGACACAATCAAATCCAACAACAACAATGAAGACCAATCAGCACTTCTAGCCTTAAAATCTCACATCAATTTGGATCCTCAACACATGTTGTCAAATAATTGGTCCACCACCTCTTCCCTATGCAATTGGTTTGGTATCACTTGTGATGCAAATACAAGAAGGGTAACATCCTTAAATCTCACAAACATGAACTTAAATGGTACCCTTCCTTCTCAATTAGGGAACTTAACTTTTCTTCTAAACCTTGATCTTCACAATAATAGCTTTAATGGTATTGTTCCAAAGGAACTGGGCTTGTTACCCAGATTGGAGGTTCTCAACTTGTGCACAAATAACTTTGGTGGTGAACTTCCACCATGGATTAGTGAGTTATCTAGCCTCCAAAGTTTGAGTCTTTGTAACAATAGTTTTTCAGGGTCAATCCCTACTTCACTATCTAACTTGTCAAAGTTGAATAGTTTGAATTTGACCTTTAATCTCATAAGTGGAAGCATTCCACCTGAGCTTGGAAGGCTTCATAACCTGAGTGTTTTGGACTTGTCACACAATAAGTTATCTGCTGATATTCCTTCTTCAATCTTCAATATCTCCACACTCCAAGTCATTGATTTAGCCTATAATTCTTTGTCAGGAAGCATTCCTCAAAATGTTGGGAATCTATCACAATTAAGAAGTATAGATTTGAGCAAGAATAATCTTGTAGGCAACGTACCATTATCCTTTTTCAATATCTCAAATCTTGGGCAGATTAGATTCTCTTACAATAACCTAACTGGCTCTCTTCCATGGGATTTGTGCCATGCGTTCCCAATGCTTGAATTTCTTGACACCTCTGGAAATTCATTTTTCGGTGAAATTCCATCAAGTTTGCATCAATGTAGGAAGCTCAAATTTCTGAATATGGACAACAATAGAATTTACGGACACCTACCAAGTGATATCGGCAACTTATCTATGCTTCAAACCTTAAGTCTTAACAACAACAATTTAACAGGTTCACTTCCTCAGTCTCTTTTCAACATCTCCAGTTTAAGACTAATAAACCTTCGGAACAACTTCTTTGGTGGTCAACTTCCTGAAGAGATGTGTGATCAAGCTCATTCCTTACAACACATTTCTATATTAAATAACAATGTTGGTGGCACCATTCCAAAGTCTATTGGCAACTGCACCTCATTAGTAAACTTATATCTCGGAGCAAACTTTTTCACAGGTACAATACCCTATGAGATAGGTGACAAATTAAGAAAGCTTGAGATATTGCACTTACAAGGCAACAAACTAACAGGATCAATCCCTCCAAACATCTTCAACATCTCAGGACTACAAAGCCTCTCACTCTCAAACAACAATCTATCAGGAAATCTTCCAATTCAAGCACATCACACCCTCTCCAATCTCCAATTCCTCTACATTTCTGGGACCAACCTTAGTGGAGAAATTCCAACACCTCTTTTCAATGCTTCAATGCTACTTGAGCTAGTACTTGCCAACAGTTCCTTTTCAGGACCTATACCTGATTCATTTGGCAACTTGAGAAATCTCCAGGTCCTATATCTCTTGGGAAACAACTTCACTGGTGGTCTTGGTTTCCTCAATTCACTCACACAATGCAGGCAATTGACAAAGATTCTTTTAGCATTTAATCCCCTTGGTGGAACACTTCCAAATGCCATTGGAAATCTTTCACAATCTCTTCAAAGGTTTGATGTGAGGAGTTGTAACATCAAGGGTGAAATTCCTCCACAGATTGGAAACTTGAAGAACCTATATGATTTAAAGATGTATAACAACCAATTTATTGGAGAGATTCCAAGCACAATTGGGAACTTACAGCTTCTTCAATTATTGGACCTTTCGAACAATAGGCTAAATAGCTCTATCCCAGAACAAATTTGCAGGATTCAGAGTTTGAACCAGTTGATTCTTAGCAATAACAACATTTTTGGGCCAATTCCAAGATGTGTGGATCATCTTTCTTCTCTAAGAATACTTTACTTAGATTCCAACAATCTAAACTCCACTATACCTTCCACACTTGGGAGCCTCAGTGATATCTTGGAGGTAAATTTATCCACCAATGGCCTTGAAGGGTCTTTGCCAGCTGAGATAAGTAGCATGAATGCTGTGATCAATTTGGATATTTCATATAACAAGCTTTCAGGAAAAATTCCCACCGGAATTGGTAGCTTGCAAAGAATATTGAATCTCTCATTAGCCTATAACATGTTACAAGGGCCTATTCCTGATTCAATTGGGAACATGTTGAGTTTGGAATTTCTTGATTTTTCCCATAATCTTTTATCAGGAACCATTCCTAAGTCCTTTGTGAACATTGTTGATCTCAAGTTTATAAACTTGTCTTATAATAGGCTATATGGTGAGATTCCTTATGGTGGCAAGTTTATAAATTTCAAACCTCAATCATTCATGATGAATGATGGACTCTGTGGAAGACCAAATTTTGGAGTCCCACCATGTTCCAATGATAGTGCAAAAAACAGTAGGAGATCCAAAGCTCTGAAATTGGCAATACCCTTAATTGTATTATGCATGATTCTTGCATGTGCAGTTATTCTGATTTACAGAAGAAAACTAAGAAAGGGTTCAGTTGCTGAAGACTTACCATCGTTTCGATTTCCAAGTCGAATTTCCTACTTTGAACTCATGGAGGCAACACAGAAATTTGATGAGAGCAATCTTATTGGAAGAGGGGGTTTAGGTTCTGTTTTTAGAGGTGAGCTTTCAAATGGAACTGTGGTTGCTGTTAAAGTATTCAACTTGGAGATACAACAAGCACCAAGAAGCTTTGATGCAGAATGCGAAGCGATGCGAAATCTTCGCCATAGAAATCTTGTTAAAGTCATCAGCAGTTGCTCAAATTCCATTGATTTCAAGGCCTTGGTGATGGAATTTGTAGCAAATGGGAACTTGGAGCAGTGGTTGTATTCTCATAACTATTGCCTACCATTCATGCAAAGGTTGAAGGTAGTAATAGATGTTGCATGTGCATTGGAGTATCTGCACCATGGTAACACTAGACCTGTGGTGCATTGTGATTTGAAGCCAAGTAATGTTCTTTTAGATGAAGATATGGTTGCACATGTTTGTGATTTCAACATTGCTAAACTATTGGAAGAAGGTCAATCTGAAATCCATACAAACACCTTAGCCACCCTTGGTTATATGGCTCCAGAGTATGGATTGGAAGGAGTAGTGTCCCTAAAGGGAGATGTGTACAGCTATGGTATTTTGCTAATGGAAGTGTTCACAAGAAAGAAACCAACTGATGAAATGTTTTGTGAGGGACTAAGCTTAAGGTCATGGATCCAACAGTCATTGCCACGTGGGATAACTGAGGTTGTGGATCCTAATTTGATGGAGGGAGAGGAACAAGTTGTTTCTGCCATGGAAGTAGCCTTATCAAAAATCATGGACTTGGCTCTGGATTGCTCTCATGACTCTCCAAATGAGAGAATTAGTATGAAGGAGGTCTTTGTTCTGCTAAGCAAAATCAAAACCACATTTCAGCAGAGATGA 3609 0.3829 MENASWFFLILILSSCHHFMASSDTIKSNNNNEDQSALLALKSHINLDPQHMLSNNWSTTSSLCNWFGITCDANTRRVTSLNLTNMNLNGTLPSQLGNLTFLLNLDLHNNSFNGIVPKELGLLPRLEVLNLCTNNFGGELPPWISELSSLQSLSLCNNSFSGSIPTSLSNLSKLNSLNLTFNLISGSIPPELGRLHNLSVLDLSHNKLSADIPSSIFNISTLQVIDLAYNSLSGSIPQNVGNLSQLRSIDLSKNNLVGNVPLSFFNISNLGQIRFSYNNLTGSLPWDLCHAFPMLEFLDTSGNSFFGEIPSSLHQCRKLKFLNMDNNRIYGHLPSDIGNLSMLQTLSLNNNNLTGSLPQSLFNISSLRLINLRNNFFGGQLPEEMCDQAHSLQHISILNNNVGGTIPKSIGNCTSLVNLYLGANFFTGTIPYEIGDKLRKLEILHLQGNKLTGSIPPNIFNISGLQSLSLSNNNLSGNLPIQAHHTLSNLQFLYISGTNLSGEIPTPLFNASMLLELVLANSSFSGPIPDSFGNLRNLQVLYLLGNNFTGGLGFLNSLTQCRQLTKILLAFNPLGGTLPNAIGNLSQSLQRFDVRSCNIKGEIPPQIGNLKNLYDLKMYNNQFIGEIPSTIGNLQLLQLLDLSNNRLNSSIPEQICRIQSLNQLILSNNNIFGPIPRCVDHLSSLRILYLDSNNLNSTIPSTLGSLSDILEVNLSTNGLEGSLPAEISSMNAVINLDISYNKLSGKIPTGIGSLQRILNLSLAYNMLQGPIPDSIGNMLSLEFLDFSHNLLSGTIPKSFVNIVDLKFINLSYNRLYGEIPYGGKFINFKPQSFMMNDGLCGRPNFGVPPCSNDSAKNSRRSKALKLAIPLIVLCMILACAVILIYRRKLRKGSVAEDLPSFRFPSRISYFELMEATQKFDESNLIGRGGLGSVFRGELSNGTVVAVKVFNLEIQQAPRSFDAECEAMRNLRHRNLVKVISSCSNSIDFKALVMEFVANGNLEQWLYSHNYCLPFMQRLKVVIDVACALEYLHHGNTRPVVHCDLKPSNVLLDEDMVAHVCDFNIAKLLEEGQSEIHTNTLATLGYMAPEYGLEGVVSLKGDVYSYGILLMEVFTRKKPTDEMFCEGLSLRSWIQQSLPRGITEVVDPNLMEGEEQVVSAMEVALSKIMDLALDCSHDSPNERISMKEVFVLLSKIKTTFQQR 1202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00987 1202 SUPERFAMILY RNI-like 485 821 - -
Arst4g00987 1202 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1039 1051 IPR008271 GO:0004672|GO:0006468
Arst4g00987 1202 Pfam Protein tyrosine and serine/threonine kinase 923 1189 IPR001245 GO:0004672|GO:0006468
Arst4g00987 1202 ProSiteProfiles Protein kinase domain profile. 919 1199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g00987 1202 FunFam Serine-threonine protein kinase plant-type 901 995 - -
Arst4g00987 1202 FunFam Leucine-rich repeat receptor-like protein kinase 31 190 - -
Arst4g00987 1202 SUPERFAMILY Outer arm dynein light chain 1 78 237 - -
Arst4g00987 1202 Gene3D Ribonuclease Inhibitor 290 387 IPR032675 -
Arst4g00987 1202 Gene3D Ribonuclease Inhibitor 30 187 IPR032675 -
Arst4g00987 1202 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 996 1202 - -
Arst4g00987 1202 ProSiteProfiles Leucine-rich repeat profile. 197 219 IPR001611 GO:0005515
Arst4g00987 1202 PRINTS Leucine-rich repeat signature 634 647 - -
Arst4g00987 1202 PRINTS Leucine-rich repeat signature 198 211 - -
Arst4g00987 1202 Pfam Leucine rich repeat 197 256 IPR001611 GO:0005515
Arst4g00987 1202 Pfam Leucine rich repeat 439 500 IPR001611 GO:0005515
Arst4g00987 1202 Pfam Leucine rich repeat 759 815 IPR001611 GO:0005515
Arst4g00987 1202 PANTHER LEUCINE RICH REPEAT KINASE 2 557 1199 - -
Arst4g00987 1202 PANTHER LEUCINE RICH REPEAT KINASE 2 557 1199 - -
Arst4g00987 1202 SMART LRR_sd22_2 243 269 - -
Arst4g00987 1202 SMART LRR_sd22_2 438 464 - -
Arst4g00987 1202 SMART LRR_sd22_2 634 660 - -
Arst4g00987 1202 SMART LRR_sd22_2 195 221 - -
Arst4g00987 1202 SMART LRR_sd22_2 778 804 - -
Arst4g00987 1202 SMART LRR_sd22_2 340 366 - -
Arst4g00987 1202 SMART LRR_sd22_2 147 173 - -
Arst4g00987 1202 Gene3D Phosphorylase Kinase; domain 1 902 995 - -
Arst4g00987 1202 Gene3D Transferase(Phosphotransferase) domain 1 996 1202 - -
Arst4g00987 1202 FunFam Leucine-rich repeat receptor protein kinase EMS1 212 289 - -
Arst4g00987 1202 Gene3D Ribonuclease Inhibitor 388 555 IPR032675 -
Arst4g00987 1202 Pfam Leucine rich repeat N-terminal domain 31 72 IPR013210 -
Arst4g00987 1202 SUPERFAMILY Protein kinase-like (PK-like) 898 1196 IPR011009 -
Arst4g00987 1202 SMART serkin_6 919 1199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g00987 1202 Gene3D Ribonuclease Inhibitor 556 859 IPR032675 -
Arst4g00987 1202 Gene3D Ribonuclease Inhibitor 188 289 IPR032675 -
Arst4g00987 1202 SMART LRR_typ_2 171 194 IPR003591 -
Arst4g00987 1202 SMART LRR_typ_2 634 658 IPR003591 -
Arst4g00987 1202 SMART LRR_typ_2 340 364 IPR003591 -
Arst4g00987 1202 SMART LRR_typ_2 778 801 IPR003591 -
Arst4g00987 1202 SMART LRR_typ_2 195 219 IPR003591 -
Arst4g00987 1202 SMART LRR_typ_2 438 462 IPR003591 -
Arst4g00987 1202 SMART LRR_typ_2 487 511 IPR003591 -
Arst4g00987 1202 SMART LRR_typ_2 123 147 IPR003591 -
Arst4g00987 1202 SMART LRR_typ_2 682 706 IPR003591 -
Arst4g00987 1202 SMART LRR_typ_2 99 122 IPR003591 -
Arst4g00987 1202 SMART LRR_typ_2 243 266 IPR003591 -
Arst4g00987 1202 SUPERFAMILY RNI-like 188 497 - -
Arst4g00987 1202 FunFam LRR receptor-like serine/threonine-protein kinase EFR 550 856 - -
Arst4g00987 1202 CDD STKc_IRAK 925 1195 - -
Arst4g00987 1202 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 290 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00987 Arst-Chr4 7988623 7995552 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00987 1 1196 Receptor kinase-like Gene Family AT5G46330 33.956 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Arst4g00987 PK_Tyr_Ser-Thr 1.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00987 - K13420 qsa:O6P43_012786 1160.59