Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00931 ATGGAATCCGGTGGTGACGGCCGCGGTCACGGCGGAAGAGGGCTACGCCGCCAACAACGACAGCCGGAGCTCAATCTTCAACCACAATGGCGTCGTCCCTTAACATCACCCACAACCTCACACTCAAACATCACTCTCCAACCCCAATGGCGACGATCGACGCAACCGCCGCCAGCAGCCCTTCCTTCTCACCCTCAGTATTCTGCCACCGCCGCTGAACAACCGCGTGAGCTCCTTCTCCAACCAGAATGGCGCCGCCCGAGGCCCCCGACGACGACAACAACTTCTTCTCCGGAACCGGAACCGGCACGGAGGCTACCGAGGCCCACTTCTTCGTTCTGGAACCAGAATCAGTATTCTCCGAAGCCGCAGAGCTCGAGTTCCGGCAGTGAAGGTTCTAGAACTTCCAGCGCTGCTGACCATGCTGACTTTTGGCGACTTCCCTCAGGTATCTACAATGATTCTCAAGCTCCCAAACTAGAAAGACTGCAAATATCCAGACAGTTTGCTACCCCATGTAGTACCCTCGAAAGGAAGGATAAGCTTTCACCTATTCGGAGACCCGACAATGGTGGCACATTGGCAATTCTAACTAACAAACTCCGTGTTAATCATTTCCTTGTGAAGTTAAATCCAGAGAGTGTAATAATGCATTACAATGTTGGCGTTAAACCAAAGTTTCCCTCAAAGCATGGCCGGCCTCAGAAATTATCAAAATCTGATCTGTCCATGATTAGAGATAAATTGTTTTCTGATGATCCAGAGAGATTACCCTTGGATATGACTGCATATGATGGTGCAAAGAATATCTTTAGTGCAATACAATTACCGGAAGAAACCTTTACTGTGGAGCTTTCTGAAGGAGATGATGAAAAGACCCTTACATATAGTGTTACCTTAACACTTGTTAATACATACAGGCTTCGCAAGCTAATGGACTATCTTAATGGTCACAGCCTCTCAATTCCCAGGGATATTTTACAAGGGATGGATGTGGTGGTCAAGGAGAATCCATCTAGGCGCACTGTTGCAGTGGGACGACACTTCTATCCCCCTATGACACTGAAAGATCTTCACCGCGGCATAATTGCTGTTGGTGGGTTTCAGCATAGTTTAAAGCCTACATCGCAGGGTCTGTCCCTATGCGTAGACTACTCTGTGTTGGCTTTCCGAAAGCAAGTGTCAGTCTTGGATTTCTTGCATGAGCATATACATAATTTTAAGTTGGAGGAATTTGAATACTTCAGAAAGGATGTTGAAGATGCACTTATTGGATTGAAAGTTAGTGTGACTCATCGTAAATCCAAACAGAAATATACTGTTGTGAGATTAACACCTCAGAATGCAAGGTACGTCACTTTTCCCATTGACAATGCTGAGGGGTGGAATCTCTCAAAGAATGCTAGTCTTCTTAGCTTTTTTAGAGACAAATATGGGAAAGACATTGTATACAAAGATATTCCCTGTTTAGACTTAGGGAAAGGCAACAAGAAGAACTATGTACCTATGGAATTCTGTGTTTTGGTTGGGGGGCAAAAATATCCTAAAGAACGTCTGGATGCAGATTCTGCAAAGACATTGAAAGCACTGTCACTAGCTCACCCAACTGAGAGGGAGAGTGCAATACAAAAGATGGTGCACTCAAATGATGGACCTTGCGGTGGTGGTGTGATAACAAATTTTGGAATGAAAGTGAACACGAACATGACAACCATTCTAGGACGTGTCATTGCCCCCCCAGAATTAAAGCTAGGTGATCCAAATGGCAAGGCTATCAAGATATCGTTGGATCTAGAGAAATGTAATTGGAACCTTCTTGGAAGATCAATGGCAGAAGGCAAACCAGTTGATTGTTGGGCCATTCTTGATTTTACTAGTTCTGGGTCATATAGGCACCAATTGAGAGTCAACGAATTCGTTAAAAAGCTTATTGGTAAATACGAAAGAATGGGTATAAACATGCAGGAGCCCATTTGGTATGAAGAATCTTCAATGCAGATACTTGCAAGGAATGATTTGCTCTCTGAATTACTTCAAAAGATTAGCAATACTTGTAAACAGAATCATGGTCACATGCAATTTCTCCTGTGTGTGATGACTAAGAAAAGTCCAGGTTACAAGTACCTTAAGTGGATTTCTGAGACCAAAGTTGGTATAGTGACACAATGCTGCTTATCTCATAGTGCTAATGAAGGGGATGACCTATTTTATACTAATCTGGCCCTCAAGATCAATGCCAAGCTTGGAGGCAGTAATGTAGAGCTCAACAATATGTTCCCTTACTTTGAGGAAGATAGGCATGTTATGTTTGTTGGGGCTGATGTCAATCATCCTGGTTCTCGGGACACCAAGAGTCCATCAATTGCTGCTGTGGTTGCAACTGTTAATTGGCCTGCAGCAAATCGCTACGCAGCACGTGTTTGCCCTCAGTACAATCGGAGCGAGAAAATACTCAACTTTGGGGAAGTTTGCTTTGAGCTTGTTGCATGTTATAGAAGGATGAATGGAGTCAGGCCTGAAAAAATCATCATTTTTCGTGATGGGGTGAGTGAGTACCAGTTTGATATGGTTCTTAACGAAGAGCTACAGGATTTGAAGAGAGAATTCCAGAGATTAAATTACTTCCCAACTATCACTCTTATTGTAGCACAAAAACGACATCAAACTCGATTCTTTCCAGAGGGTAGGAGGGATGGATCTTCCACTGGCAATGTTCTGCCAGGAACAGTTGTTGATGCAAAAGTTACTCACCCTTTTGAGTTTGACTTTTACCTTTGTAGTTACTATGGAAGCATAGGCACCAGCAAGCCTACTCACTACCACGTTTTATGGGATGAACACAGGTTTAAATCTGATGAATTGCAGAAGCTTATATATGACATGTGCTTCACCTTTGCAAAGTGCACTAAACCTGTATCGTTAGTCCCTCCAGTGTACTATGCTGACCTCGCTGCTTATAGAGGACGATTATACCATGAAGCAAGGGTTGGGATGCAATCTATGAAATCAGTAGGATCCTCATCTTCTAAGGCTTCTTTTGAGCAGGGATTTTATAGGTTGCATCCTGACTTGGAAAACTTGATGTTCTTCATCTAA 3096 0.437 MESGGDGRGHGGRGLRRQQRQPELNLQPQWRRPLTSPTTSHSNITLQPQWRRSTQPPPAALPSHPQYSATAAEQPRELLLQPEWRRPRPPTTTTTSSPEPEPARRLPRPTSSFWNQNQYSPKPQSSSSGSEGSRTSSAADHADFWRLPSGIYNDSQAPKLERLQISRQFATPCSTLERKDKLSPIRRPDNGGTLAILTNKLRVNHFLVKLNPESVIMHYNVGVKPKFPSKHGRPQKLSKSDLSMIRDKLFSDDPERLPLDMTAYDGAKNIFSAIQLPEETFTVELSEGDDEKTLTYSVTLTLVNTYRLRKLMDYLNGHSLSIPRDILQGMDVVVKENPSRRTVAVGRHFYPPMTLKDLHRGIIAVGGFQHSLKPTSQGLSLCVDYSVLAFRKQVSVLDFLHEHIHNFKLEEFEYFRKDVEDALIGLKVSVTHRKSKQKYTVVRLTPQNARYVTFPIDNAEGWNLSKNASLLSFFRDKYGKDIVYKDIPCLDLGKGNKKNYVPMEFCVLVGGQKYPKERLDADSAKTLKALSLAHPTERESAIQKMVHSNDGPCGGGVITNFGMKVNTNMTTILGRVIAPPELKLGDPNGKAIKISLDLEKCNWNLLGRSMAEGKPVDCWAILDFTSSGSYRHQLRVNEFVKKLIGKYERMGINMQEPIWYEESSMQILARNDLLSELLQKISNTCKQNHGHMQFLLCVMTKKSPGYKYLKWISETKVGIVTQCCLSHSANEGDDLFYTNLALKINAKLGGSNVELNNMFPYFEEDRHVMFVGADVNHPGSRDTKSPSIAAVVATVNWPAANRYAARVCPQYNRSEKILNFGEVCFELVACYRRMNGVRPEKIIIFRDGVSEYQFDMVLNEELQDLKREFQRLNYFPTITLIVAQKRHQTRFFPEGRRDGSSTGNVLPGTVVDAKVTHPFEFDFYLCSYYGSIGTSKPTHYHVLWDEHRFKSDELQKLIYDMCFTFAKCTKPVSLVPPVYYADLAAYRGRLYHEARVGMQSMKSVGSSSSKASFEQGFYRLHPDLENLMFFI 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00931 1031 Pfam N-terminal domain of argonaute 200 334 IPR032474 -
Arst4g00931 1031 SUPERFAMILY PAZ domain 389 549 IPR036085 GO:0005515
Arst4g00931 1031 Pfam PAZ domain 408 523 IPR003100 GO:0005515
Arst4g00931 1031 MobiDBLite consensus disorder prediction 1 17 - -
Arst4g00931 1031 CDD Piwi_ago-like 557 991 IPR045246 -
Arst4g00931 1031 Gene3D - 576 757 - -
Arst4g00931 1031 MobiDBLite consensus disorder prediction 109 137 - -
Arst4g00931 1031 CDD PAZ_argonaute_like 413 509 - -
Arst4g00931 1031 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 200 994 - -
Arst4g00931 1031 SMART PAZ_2_a_3 394 532 IPR003100 GO:0005515
Arst4g00931 1031 Pfam Argonaute linker 1 domain 344 392 IPR014811 -
Arst4g00931 1031 Pfam Piwi domain 695 989 IPR003165 GO:0003676
Arst4g00931 1031 ProSiteProfiles PAZ domain profile. 394 510 IPR003100 GO:0005515
Arst4g00931 1031 SMART DUF1785_2 343 393 IPR014811 -
Arst4g00931 1031 MobiDBLite consensus disorder prediction 1 139 - -
Arst4g00931 1031 ProSiteProfiles Piwi domain profile. 694 993 IPR003165 GO:0003676
Arst4g00931 1031 MobiDBLite consensus disorder prediction 20 56 - -
Arst4g00931 1031 SMART Piwi_a_2 694 992 IPR003165 GO:0003676
Arst4g00931 1031 Gene3D - 762 1031 IPR036397 GO:0003676
Arst4g00931 1031 SUPERFAMILY Ribonuclease H-like 680 993 IPR012337 -
Arst4g00931 1031 Gene3D paz domain 388 514 - -
Arst4g00931 1031 FunFam Protein argonaute 7 388 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00931 Arst-Chr4 7542365 7548968 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00931 201 1006 Eukaryotic Initiation Factors Gene Family AT1G48410 35.253 1.81e-144 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00931 K11593 - gmx:100783571 1470.29