Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00906 ATGATGGCAGAAGTCGGTGACCACAATAGCAACACCACCACATGTGCTGCAGTTCTCAACTCCATGGAAGAGACCGCCTTTTGCTGTGAACAATTGCCAGAGGGTGAATGCATTGAGGCTCAGAAAGAAGAAGACGGTTCACTAGTTGAGTTGGATTGTCGAAATGGCTTTTCTGAAGGAAGAAAGGAGTTCGTCACACCTGCTGTCGGAATGGAGTTTGAGTCTTATGATGATGCTTACAATTATTACATCTGCTATGCCAAGGAAGTCGGATTTCGTGTAAGGGTGAAGAATTCATGGTTCAAGCGAAACAGCAGAGAAAAATATGGTGCGGTGCTTTGCTGTAGCAGTCAGGGTTTCAAAAGAATAAAGGATGTTAACCACATGAGGAAAGAAACAAGAACTGGTTGTCCTGCAATGATAAGGATGAGGTTAATGGACTCTCAGAGGTGGAGGATACTCGAGGTCACACTTGAACATAACCACATGTTAGGTTCTAAGATACACAAATCAGTTAAGAAGATGGGAACTGGAACCAAAAAGAAGTCATTGCCGAGTTCAAATGCTGAAGTGCACACGGTGAAGTTATACCGTGCACTTGTGATAGATGCAGGAGGTAATTCTAGTGCAATCTCAAATGCTAGAGAAGACAGAACTTTGTCGGAATTTTGTAATAGGTTGAACCTTAAAAGGGGTGACACACAAGCCATTTATAATTACCTGTGTCGTATGCAATTGACTAATCCTAACTTCTTTTACTTGATGGATTTCAATGATGAAGGGCATTTGAGGAATGCATTTTGGGCGGATTCTAGGTCCAGGGCTGCATGTGGTTATTTTGGTGATGTTATTTACTTTGACAACACTTATTTGTCAAGCAAATATGAAATCCCTCTCGTGGCTTTTGTTGGAATAAATCATCACGGGCAATCAGTATTACTTGGTTGTGGTCTACTTGCAGGTGAAACAATAGAATCTTATGTATGGTTGTTCAGAGCATGGATTACATCTCTGTCTGGTTGTTCTCCCCAAACTATTATCACCGATAAGTGCAAGGTTTTGCAAAGTGCCATTGCAGAAGTTTTTCCCCAATCTCTCCACCGTTTTGGTTTGCCATTAATCATGAAAAAAGTACCAGAAAAATTGGGAGGGTTGCGCAACTATGATATGATTAGGAAAGAACTGATTAAAGCAATTTATGAGACATTGAAAATGAATGAATTCGAATCAGCATGGGCATTCATGGTTCAACGTTTTGGAGTTGGTGATCATGAATGGCTTTGTTCTCTATATGAAGATCGGAATTGTTGGGCACCGGTATATGTGAAGGATACATTTTTTGCCGGAATGTCTGCAACACGACCTGGTGAAAGCTTTACTCCATTTTTTGATAGATTTGTGCACAAGCAGACTCCTTTAAAGGAGTTTCTTGATAAGTATGAACTAGCTCTCCACAAGAAGCACAAGGAAGAGGCTCTTGCAGACATAGAATCAAGAAGCTCAACCCCCTTGCTGAAAACTAGATGTTCTTTTGAATTGCAGCTCTCTAGAATGTACACTAGGCAAATGTTCTTGAAGTTCCAATTTGAGGTGGAAGAAATGTACTCTTGTTTCGGAACAACACAGTTACACGTGGATGGTCCGGTCATAATTTTCTTGGTCAAGGAGCGTGTCTTGTGCGAAGGAAATCGGCGCGAGATTAGGGACTTTGAAGTTCTGTACAGTAGGACAGCAGGCGAAGTTCGCTGCATCTGTAGTTGCTTTAATTTTTATGGATATTTATGCCGGCACGCATTGTGTGTGCTAAATTTCAATGGCGTGGAGGAGATACCTTCCAGATACATTCTTTCAAGGTGGAAGAAAGATTACAAGCGCCTTCATATTCCTGATCATAACACTGGTGTTCCTGATGATATTGACCATTCTCAATGGTCTAATCAGTTATTTAGAAGTGCCTTGCAAGTTGTTGAGGAAGGGACAGTTTCTGTGGACCATTACAATGTAGCTTTGCATGCTATTGAAGAATCACTAAATAAGGTTCATGATGTAGAATATAGGCAGATAATAGATGATGGATCTCCAAACAGTGATCAGCTGCTTGAGGTTGCGGATGAGCAAAACATTCTTGTGAATGGCTGCGGTCAGTTATTTGAGATTGATGGAAGTGAACATGAGAATGGGAGGGATGAAACAACAGTGATTGATGGTTATGGTGGAGAATCTCAAGGGAAAGGCTATCCTCCGCCGGTTGTAGGTATGGAGTTTGATACTTATGATGATGCTTACAACTATTATAATAGCTATGCCAAGGAGATTGGATTTGCTATTCGGGTTAAGTCGTCATGGACCAGACGTAACAGCAAAGAGAAGCGCGGTGCTGTGTTGTGCTGCAACTGTGAGGGCTTCAAAACACTTAAGGAAGCAAATAGCCACAGGAAAGAAACAAGAACAGGTTGTCTGGCGATGATTAGGTTGCGATCAGTGGAATCTAACAGATGGAGGGTGGATGAAGTCAAGCTTGAGCACAACCATTCATTTGATCCTGAGAGAGCACAAAACTCGAAATCACATAAGAGGACAGACGGTGGGTCGAAAAGAAAACTTGAGCCAACTCTAGATGTTGAAGTACGAACAATCAAGCTATATCGAATGCCTGTTGGGGATGCATCAGGTTATGGAAGTCCAAATTCTAATGAAGGAGGAACTAGCACCAACCTTAATTTTTCTAGGCATTTGAAACTTAGGAAAGGTGATACAGAACTTGTTTCAAACTACTTCTGCAAATGTCAACTTATAAATCCCAATTTCTTCTATGTTATGGACTTGAATGATGATGGACAACTGCGGAACATTTTTTGGATTGATTCTAGATCTAGAGCTGCATATAGTTATTTTGGTGATGTGGTTGCATTTGACTCTACATGTTTGTCAAACAATTATGAGATTCCACTTGTTTCATTTGTCGGTGTTAATCACCATGGGCAGTCTATTTTACTTGGATGTGGTCTGCTTGCAGATGAGACATTTGAAACATATAATTGGTTTTTTAGGGCGTGGCTTACATGTATGTCCGGCCGTCCTCCTCAAACTGTTGTTACAAACCAGTGCAACAAGGCCATGCAAAGTGCAATAGCGGAGGTTTTCCCGAGAGCTCACCACAGAATTTGTCTATCACAAGTCATGCAGAGTATTCTCGGATGTTTGGTACAGTTTCAGGAATACGAGGCAATTCAGATGGCATTGTCTAGAGTGATATATGAAACTAAGACAATCGATGATTTTGAAAGGGCTTGGGATGAACTTACCCAGCATTTTGGAATAAGAAATCATGAAAAGCTTCAATCCTTGTATGGTGAACGTGAGCACTGGGCTCCTGCTTACACCAAGGACACGTTTTTTGCTGGAATTTCTGATCAAGAAAAAGGTGAGTCCGTGGTACCTTTTTTTAAGGGTCATGTGCATCAGCAAACTTCCTTGAAAGAATTTTTTGAGATTTATGAATTAGTTATGGAGCAAAAGAGAAAAACTGAAGCTATTGATGATTTCAAGTCGCGAGATTCTAGTCCTTCACTGAGAACAAGGTACTACTATGAGTTGCAACTGTCCAAATTGTACACAAATGCAATGTTCAGGAAGGTCCAGGAGGAGATTGTGATGATGTCCTCTTGTTTCGGCATCACAGAAAGTCAAACAAATGGATCTACAGCGACATACATGGTTAAAGAGCGCCAAGGCGAGGAACTTGTCCAAGATGCAGGGCATGTTGAAGTCACATATGATAAAACCGGAGCAGAAGTGCGCTGCAGTTGTTGTTGCTTTAACTTCAAAGGCTATTTGTGCAGACATGCCTTGTCTATCCTCGATTATAATGGCGTGGAGGAAATTCCTTGTCAATATGTTTTGCCGAGATGGAGGAAGGACTTTAAACGATTGTATGTACCTCACCTTAGCTCTGATAATGTTGATATCACCAACCCAGTTCAGTGTTTTGATCATTTGTACAAACGGGCGATGCAAGTTGTTGAAGAAGGGATGATATCCCAAGCTCATTATATGGTTTCTTGGCAGGCTTTTAAAGAGTCTTTGAATAAGATTCGCCTTGTATCAGATAAAATTGAGTAA 4122 0.4105 MMAEVGDHNSNTTTCAAVLNSMEETAFCCEQLPEGECIEAQKEEDGSLVELDCRNGFSEGRKEFVTPAVGMEFESYDDAYNYYICYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDVNHMRKETRTGCPAMIRMRLMDSQRWRILEVTLEHNHMLGSKIHKSVKKMGTGTKKKSLPSSNAEVHTVKLYRALVIDAGGNSSAISNAREDRTLSEFCNRLNLKRGDTQAIYNYLCRMQLTNPNFFYLMDFNDEGHLRNAFWADSRSRAACGYFGDVIYFDNTYLSSKYEIPLVAFVGINHHGQSVLLGCGLLAGETIESYVWLFRAWITSLSGCSPQTIITDKCKVLQSAIAEVFPQSLHRFGLPLIMKKVPEKLGGLRNYDMIRKELIKAIYETLKMNEFESAWAFMVQRFGVGDHEWLCSLYEDRNCWAPVYVKDTFFAGMSATRPGESFTPFFDRFVHKQTPLKEFLDKYELALHKKHKEEALADIESRSSTPLLKTRCSFELQLSRMYTRQMFLKFQFEVEEMYSCFGTTQLHVDGPVIIFLVKERVLCEGNRREIRDFEVLYSRTAGEVRCICSCFNFYGYLCRHALCVLNFNGVEEIPSRYILSRWKKDYKRLHIPDHNTGVPDDIDHSQWSNQLFRSALQVVEEGTVSVDHYNVALHAIEESLNKVHDVEYRQIIDDGSPNSDQLLEVADEQNILVNGCGQLFEIDGSEHENGRDETTVIDGYGGESQGKGYPPPVVGMEFDTYDDAYNYYNSYAKEIGFAIRVKSSWTRRNSKEKRGAVLCCNCEGFKTLKEANSHRKETRTGCLAMIRLRSVESNRWRVDEVKLEHNHSFDPERAQNSKSHKRTDGGSKRKLEPTLDVEVRTIKLYRMPVGDASGYGSPNSNEGGTSTNLNFSRHLKLRKGDTELVSNYFCKCQLINPNFFYVMDLNDDGQLRNIFWIDSRSRAAYSYFGDVVAFDSTCLSNNYEIPLVSFVGVNHHGQSILLGCGLLADETFETYNWFFRAWLTCMSGRPPQTVVTNQCNKAMQSAIAEVFPRAHHRICLSQVMQSILGCLVQFQEYEAIQMALSRVIYETKTIDDFERAWDELTQHFGIRNHEKLQSLYGEREHWAPAYTKDTFFAGISDQEKGESVVPFFKGHVHQQTSLKEFFEIYELVMEQKRKTEAIDDFKSRDSSPSLRTRYYYELQLSKLYTNAMFRKVQEEIVMMSSCFGITESQTNGSTATYMVKERQGEELVQDAGHVEVTYDKTGAEVRCSCCCFNFKGYLCRHALSILDYNGVEEIPCQYVLPRWRKDFKRLYVPHLSSDNVDITNPVQCFDHLYKRAMQVVEEGMISQAHYMVSWQAFKESLNKIRLVSDKIE 1373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00906 1373 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 740 1366 IPR031052 GO:0006355
Arst4g00906 1373 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 740 1366 IPR031052 GO:0006355
Arst4g00906 1373 ProSiteProfiles Zinc finger SWIM-type profile. 1253 1291 IPR007527 GO:0008270
Arst4g00906 1373 Pfam MULE transposase domain 283 376 IPR018289 -
Arst4g00906 1373 Pfam MULE transposase domain 968 1062 IPR018289 -
Arst4g00906 1373 Pfam SWIM zinc finger 578 602 IPR007527 GO:0008270
Arst4g00906 1373 Pfam SWIM zinc finger 1265 1288 IPR007527 GO:0008270
Arst4g00906 1373 Pfam FAR1 DNA-binding domain 763 847 IPR004330 -
Arst4g00906 1373 Pfam FAR1 DNA-binding domain 81 164 IPR004330 -
Arst4g00906 1373 SMART 26again6 581 608 IPR006564 GO:0008270
Arst4g00906 1373 SMART 26again6 1266 1293 IPR006564 GO:0008270
Arst4g00906 1373 MobiDBLite consensus disorder prediction 844 869 - -
Arst4g00906 1373 ProSiteProfiles Zinc finger SWIM-type profile. 570 606 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00906 Arst-Chr4 7314972 7321612 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst4g00906 MULE 3.5e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00906 K17604 - gmx:100796448 2330.06