LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst4g00898	ATGCAACGGCTTGCATTCTTGTCTTTAAATTCAAATAACTTCAACGGGCAAATTCCATCCGCTCTTGGTAATCTCACAAATCTATATTGGCTGGACTTGGCTGAAAACCAGCTTGAAGGGCCTATCCCAATATCAAATGAAACTTCTCTTGGTCTGGATATGCTACACAATACAAAGCACTTTCATTTTGGGGTTAACAAACTTTCAGGCAATATTCCTCCTCAGCTTTTTAGTTCAGACATGTCTCTGATACATGTGCTTTTTGAAAGTAACGAACTTACTGGCAATATTCCATCTACACTTGGACTAGTCCAGAATCTTGAGGTGGTGCGCCTTGATGGTAATTATCTAAGTGGACCTGTGCCTCCAAACGTTAGCAGCCTTACAAATGTTAGGGATTTGCTGCTCTCCAACAATCGCCTATCTGGTCCTCTTCCCAACCTTACTGGAATGAACATCCTCAACTTCCTGGATGTGAGCAATAATAGTTTTGATCCATCAGAGTTTCCACTATGGTTAACAACTCTACCATCTTTGACAACAGTAAACATGGAGAATATAAAACTTCAAGGAAATATTCCTGTTTCATTTTTCAGTTTGAGCCAGTTACAGACAGTGAATATGAAAGACAACCAGCTAAATGGAACATTAGATATTGGTACTACCATCAGCAACCAACTGGAAATCATTGATTTGCAGACCAATTTTATTGCTAAGTTTAATCCAGAAATTAATGTATCCAATGTGGAAATAATACTCGTCGATAATCCGGTTTGTGGAGGAGGATCTTCACAGGATTATTGTTCCATTCCACAACAAAACAACATGTATACAACACCACAGAACAATTGTGTGCCTGTCACCTGCAGCACAGATCAGAAAGAAAGCCCTAACTGCAAATGTGCATATCCATATACTGGAACTTTAACTTTCAGGGCACCAACCTTCTCTGACTTGCAAAACAAGTCAATCTTTGCATCTTTGGAGTCGTCTATGATGCGGTCTTTTCATCGATATAATCTACCTGTGGACACAGTTTCTGTGAGCAATCCAAGAAAGGAAGCATTATACCTTGATTTGAGTCTAGAAGTGTTTCCATCCGGCATAGATCGTTTCAACCGAACGGGGATTATCAATATAGGCTTTGTGCTTAGCAACCAGACATATAAGCCTCCTCCCACTTTTGGACCATTTTATTTTATTGCTGATGATTATGAAAACTATATGAATGACTCAGTATTCATCAACTCTGAAGGATCCAATAAATCTTCAAAAACTGGCATAATAGCTGGAGTTTCTGGTGGTGTTGTCCTGGTGATATTATTAATCATTGCAAGTGTTTATGCCTTGCACCAAAAGAATAAGGCGAAAAGAGCAACAGAGAAAAACAATCCTTTTGCAAAATGGGATGCAGATGAGAGCAATAATAGTATCCCACAGCTGAAAGGAGCAAGGCGCTTCACTTTTGAAGAAATTCAGAGCTACACCAAAAACTTCTCACAAGTCAACAGTATTGGATCTGGAGGATACGGGAAGGTTTACCGAGGAACTCTTCCAAACGGGCACCTTATTGCTGTTAAAAGAGCTCAGAAAGAATCAATGCAGGGAGGGCTGGAGTTCAAGACTGAGATTGAACTTCTATCAAGGGTCCACCATAAGAATCTTGTTAGCCTTATAGGTTTCTGCTTTGAGCAAGGAGAGCAAATGCTCATTTATGAATATGTTCCCAATGGCACTTTGAAGGATACTCTTTCAGGTAAAACAGGAATAAGATTGGACTGGATTAGAAGGCTGAAAATAACACTTGGTGCTGCCAGGGGGATGGATTATCTCCATGAGCATGCCAATCCTCCCATCATACATAGGGACATCAAATCCACAAACATATTATTGGATGAACGTTTGAATGCTAAAGTTTCTGATTTTGGACTCTCCAAACCATTGAGAGATGGTGAAAAAGGTTACGTTACCACTCAAGTCAAAGGAACAATGGGCTACTTGGACCCGGAGTACTATATGACTCAGCAATTGACAGAAAAGAGTGATGTGTATAGCTTCGGAGTACTAATGTTAGAGCTGATAACAGCAAGAAGGCCGATAGAACGAGGAAGATACATTGTGAAAGTGGTTAAGAATGCCCTAGACAAGGACAAAGAGTTCTATGGCCTTAAGGAAGTCCTTGATCCATCCATTGATTTGGGAACAACACCCCAGGGTTTTGACAAGTTTGTTGATCTTGCAATGCAGTGTGTTGATGAGTCAAGTTCTAGCAGACCCTCAATGAACTTTGTGGTGAAAGTGATTGAGAACATGTTGCAGTTGGCTGGTTCCAACCCCAATGCAGAGTCTGCATCCACTTCATCTAGTCATGAAGTAAGCAAAGGGAGTTCTCAACATCCTTACAATAATGAGTTCTTTGATTCAAGTGTTGTGATTCCACGTCCTTAA	2448	0.4032	MQRLAFLSLNSNNFNGQIPSALGNLTNLYWLDLAENQLEGPIPISNETSLGLDMLHNTKHFHFGVNKLSGNIPPQLFSSDMSLIHVLFESNELTGNIPSTLGLVQNLEVVRLDGNYLSGPVPPNVSSLTNVRDLLLSNNRLSGPLPNLTGMNILNFLDVSNNSFDPSEFPLWLTTLPSLTTVNMENIKLQGNIPVSFFSLSQLQTVNMKDNQLNGTLDIGTTISNQLEIIDLQTNFIAKFNPEINVSNVEIILVDNPVCGGGSSQDYCSIPQQNNMYTTPQNNCVPVTCSTDQKESPNCKCAYPYTGTLTFRAPTFSDLQNKSIFASLESSMMRSFHRYNLPVDTVSVSNPRKEALYLDLSLEVFPSGIDRFNRTGIINIGFVLSNQTYKPPPTFGPFYFIADDYENYMNDSVFINSEGSNKSSKTGIIAGVSGGVVLVILLIIASVYALHQKNKAKRATEKNNPFAKWDADESNNSIPQLKGARRFTFEEIQSYTKNFSQVNSIGSGGYGKVYRGTLPNGHLIAVKRAQKESMQGGLEFKTEIELLSRVHHKNLVSLIGFCFEQGEQMLIYEYVPNGTLKDTLSGKTGIRLDWIRRLKITLGAARGMDYLHEHANPPIIHRDIKSTNILLDERLNAKVSDFGLSKPLRDGEKGYVTTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELITARRPIERGRYIVKVVKNALDKDKEFYGLKEVLDPSIDLGTTPQGFDKFVDLAMQCVDESSSSRPSMNFVVKVIENMLQLAGSNPNAESASTSSSHEVSKGSSQHPYNNEFFDSSVVIPRP	815

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst4g00898	815	FunFam	Leucine-rich repeat protein kinase family protein	463	574	-	-
	Arst4g00898	815	SMART	serkin_6	499	774	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst4g00898	815	MobiDBLite	consensus disorder prediction	778	805	-	-
	Arst4g00898	815	SUPERFAMILY	Protein kinase-like (PK-like)	485	784	IPR011009	-
	Arst4g00898	815	Gene3D	Ribonuclease Inhibitor	1	47	IPR032675	-
	Arst4g00898	815	Pfam	Protein tyrosine and serine/threonine kinase	502	766	IPR001245	GO:0004672\|GO:0006468
	Arst4g00898	815	Gene3D	Phosphorylase Kinase; domain 1	469	574	-	-
	Arst4g00898	815	FunFam	Leucine-rich repeat protein kinase family protein	48	147	-	-
	Arst4g00898	815	Gene3D	Ribonuclease Inhibitor	149	302	IPR032675	-
	Arst4g00898	815	Gene3D	Transferase(Phosphotransferase) domain 1	575	793	-	-
	Arst4g00898	815	MobiDBLite	consensus disorder prediction	778	815	-	-
	Arst4g00898	815	FunFam	LRR receptor-like serine/threonine-protein kinase HSL2	575	784	-	-
	Arst4g00898	815	ProSiteProfiles	Protein kinase domain profile.	499	772	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst4g00898	815	CDD	STKc_IRAK	505	771	-	-
	Arst4g00898	815	Gene3D	Ribonuclease Inhibitor	48	148	IPR032675	-
	Arst4g00898	815	ProSitePatterns	Protein kinases ATP-binding region signature.	505	527	IPR017441	GO:0005524
	Arst4g00898	815	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	619	631	IPR008271	GO:0004672\|GO:0006468
	Arst4g00898	815	PANTHER	RECEPTOR-LIKE PROTEIN 55	2	771	-	-
	Arst4g00898	815	SUPERFAMILY	L domain-like	2	237	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst4g00898	Arst-Chr4	7215766	7221231	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst4g00898	1	813	Receptor kinase-like Gene Family	AT5G49760	56.585	0.0	863

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VIII-1	Arst4g00898		PK_Tyr_Ser-Thr	1.2e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst4g00898	-		-	aip:107638780	1545.02