Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00885 ATGCAGAAATGTTTGTGTTTAAGCATAGTCCAAGGCGTGAGGAGAGAGTGGAGAAGAAGAGAGGAGAAAGAGAAATCAAAGAGAAAGAAGAAATCAAAGAATTCGTTTGAAAATCACAACAACCGAACCGATTATTGCGAAGAATCAGCACCGCCATCACTGATCACACCAAACAACAACAACACAACCAAAAAGGAACAAAGCCACTCGCACAGAATCCGTTCATTCCCAATCGAATCGGAATCGAATCGATTGGAGGAACTTGTAATGGGGATGGAGGACGATATATCTCCGGCCGACGCTCACGGCAGCAAAACCCCCGGCAAGGAACAGCAGGCCGCCGGCGTCGGAATCCTGCTTCAGATCATGATGCTCGTCCTCTCCTTCGTCCTCGGCCACGTCCTCCGCCGCAAGAAGATTTACGTCATCCCCGAAGCCAGTGCCTCTCTTCTCATTGGCTTAATCGTTGGTGTTCTCGCTAACATCTCTGACACCGAAAATAGTATCAGGGCGTGGTTCAATTTTCACGAAGAGTTTTTCTTCCTCTTCTTGTTACCTCCTATCATATTTCAGTCTGGCTTCAGTCTTGCACCTAAACCTTTTTTCTCTAATTTTGGAGCAATTGTGACTTTTGCAATATTTGGCACATTTATAGCCTCAATAGTGACCGGTGTTTTAGTTTATCTTGGTGGGCTGGTCTTCCTCATGTATAGATTGCCTTTTGTCGAGTGCCTCATGTTTGGGGCTCTTATATCGGCGACTGATCCCGTTACTGTTTTATCAATATTTCAGGAGCTTGGCACAGATGTCAATCTATATGCTTTGGTTTTTGGAGAATCTGTTTTGAATGATGCAATGGCAATTTCTTTGTACAGGACGATGTCATTGGTTAAGACTCATCCATCCGGACAGAATTTATTAATGGTGGTTGTTAGATTTTTGGAGACTTTTGTTGGTTCAATGTCTGCAGGTGTTGGAGTGGGATTCATATCTGCTTTACTTTTTAAGTATGCAGGGTTGGATATTGACAACCTTCAGAACTTGGAGAGTTGTCTTTTTGTTCTATTTCCATATTTCTCATACATGCTTGCAGAAGGCCTTGGTTTGTCCGGTATCGTATCAATACTGTTTACAGGAATAGTCATGAAGCACTATTCATATCCAAATTTGTCACAAAGTTCTCAAAGATTTGTCTCTGCTTTTTTCGAGTTGATATCTTCACTAGCAGAGACCTTTGTATTTATATACATGGGCTTTGATATTGCTATGGAGCAACATAGCTGGTCACATGTTGGATTTATATTCTTCTCCATTATATTCATTGGAATTGCAAGGGCGGCAAATGTCTTCTCTTGTGCTTATCTGGTCAACTTGGTCAGACCTTCTCATCGAAAGATACCTCCAAAACACCAAAAAGCACTTTGGTATAGTGGACTTCGAGGAGCAATGGCCTTTGCCCTTGCATTGCAATCAGTTCATGATCTTCCAGAGGGACATGGTCAGACCATCTTTACTGCAACAACAGCAATAGTTGTTTTGACGGTATTATTGATTGGGGGATCAACCGGTACCATGCTGGAAGCTCTAGAAGTGGTTGGTGACAGTCATGGTGATAGCCCTTTGGCCACAGTGGGCACCATCACAAACAATTATGAGGAAAACAATGGTTATGTTGCTCCTTCTTATGATGAAGAATCATCATCAGGAAGCAGATTCAAGATGAAGCTAAAAGAATTCCATAAGAGTGCTGGATCATTTACTGCAATAGATAAAAACTTTCTGACCCCATTCTTTACAAGTCAAAGTGGAGATGAAGATGATGAAGATGAGCCATTGACTTCAACAAGACCGGAAAGACCGGGACGACCGGGACTTAACCGTCACAATCCTTATTCATCATGA 1902 0.4243 MQKCLCLSIVQGVRREWRRREEKEKSKRKKKSKNSFENHNNRTDYCEESAPPSLITPNNNNTTKKEQSHSHRIRSFPIESESNRLEELVMGMEDDISPADAHGSKTPGKEQQAAGVGILLQIMMLVLSFVLGHVLRRKKIYVIPEASASLLIGLIVGVLANISDTENSIRAWFNFHEEFFFLFLLPPIIFQSGFSLAPKPFFSNFGAIVTFAIFGTFIASIVTGVLVYLGGLVFLMYRLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSLVKTHPSGQNLLMVVVRFLETFVGSMSAGVGVGFISALLFKYAGLDIDNLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGIVMKHYSYPNLSQSSQRFVSAFFELISSLAETFVFIYMGFDIAMEQHSWSHVGFIFFSIIFIGIARAANVFSCAYLVNLVRPSHRKIPPKHQKALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVVLTVLLIGGSTGTMLEALEVVGDSHGDSPLATVGTITNNYEENNGYVAPSYDEESSSGSRFKMKLKEFHKSAGSFTAIDKNFLTPFFTSQSGDEDDEDEPLTSTRPERPGRPGLNRHNPYSS 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00885 633 MobiDBLite consensus disorder prediction 17 74 - -
Arst4g00885 633 NCBIfam sodium/hydrogen exchanger 3 122 535 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Arst4g00885 633 PANTHER SODIUM/HYDROGEN EXCHANGER 102 609 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Arst4g00885 633 PRINTS Na+/H+ exchanger signature 248 258 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Arst4g00885 633 PRINTS Na+/H+ exchanger signature 208 216 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Arst4g00885 633 PRINTS Na+/H+ exchanger signature 193 207 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Arst4g00885 633 PRINTS Na+/H+ exchanger signature 179 190 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Arst4g00885 633 Gene3D - 241 292 - -
Arst4g00885 633 MobiDBLite consensus disorder prediction 597 633 - -
Arst4g00885 633 Pfam Sodium/hydrogen exchanger family 124 527 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00885 Arst-Chr4 7141636 7148167 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00885 110 529 Antiporters AT3G05030 34.615 3.31e-54 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00885 K14724 - gmx:100790830 871.307