Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00860 ATGGGAAGAAGAAACGGGGGAAGGTCACTGCATGGAACCCTCCGCCGCCGGCTGGAGTCGTGCATGTCCAGTCACTCCACTGTCGATGATATCGTTAACCACCTCCGCTCCACTTACCCCGATTACCAACGCACCAAGCACCAAGCCCTCACTCGATTAGTTCAACAAGTCCTCGAGCCACGTTCCAAACACGCGACCAAAGTCTCTGCCAAGCGCAGCGGCCACGATGGCGACGAAGAAAGTGGTCGACGCGCGCTCCGAAAGAGACAGAAGAGAGTCGACGAAGGTGAAGAGAGGTTGCAGGGCGACAAAGAAACTCAGGGTTCTGCATCTTCCTCCTCTGCTTCAAGCTTGAGCGCGTCTGGGAGCAGCGGCAGTGAGGATGATGATGGCAGCACAGTGTCTGTTTCGACATCGGAGGACGCAAAATACCGGGAGAAGTACGAACCTGCTGTCGATTTGATGAAGATGATGCTGCGGAAAGCGTATACTCCTACGAAGGATGATAGTGCGAGGAAGATGAAACACGTCGTGCAAGATAAGAACGTTGAAATGGAGGTCGCCAATAGTGACAAGGCTACTAATGAGATTTGCGCTAAGAATGGAGGCGGAGGCAAAGTGAAGGCGGCGTCGAATTTGAAGGGTTCCGTTTCAAATGGCGACCATGGTGGTGGCAGCTTTGTTAAGCTGAAGGCAGGACCTAGGTTAAGTGATTTGGGTGGGATGAATGATCTTCTGGAAAAGCTGGTGGAAGAAGTGATTGTTCCATGGTATTATCCTGAGCTTCCAAGAAAGCTATGTCGTACTCCTACTACTGGAATCTTGCTGCATGGGCCACCCGGTTGTGGCAAGACCACACTGGCTCACGCCATAGCTAATGAGACCCGTGTTCCCTTCTATCCGATATCAGCTACTGAGTTGGTTTCTGGAGTATCGGGTGCATCTGAAGAGAATATCAGAGAGCTTTTCGCTAAAGCATATAGGACTGCCCCATCAATTGTCTTCATTGATGAGATTGATTCAATTGCTTCGAAAAGAGACAATTTACAGCGAGAGATGGAGAAAAGAATTGTAACACAGTTACTTGCCAGCATGGATCAATCAAGTAGGCATATGCAATCCGCTAATGGTTTGGACAGTTCTAATGTTCATCCCAGTTATGTTCTTGTAATTGGAGCTACAAATAGGCCTGATGCTCTTGACTCGGCCTTGAGAAGGCCTGGGCGGTTTGATCGGGAGTTGAGAGAACATATCCTCTCTTTGCTCACTCGCAATCTTCCACTTCAGGGTTCATTGGATCTAAAATACATAGCCAGGTCTACACCAGGATATGTCGGTGCTGATTTGGCAGCCTTGATTACGGGGGCGTGTAATTTGGCCTTGAAGAGAATTATTTCCAAAAGGAGAGGGGAACATGAGACAAGTTATCTTGGAGACTGGTGGGGCGAACCTTGGCCTCTTGAAGATATGGATAAGCTTGTCTACACAATGTCTGATTTCCAGGAAGCTTTGAAAATTGTACAACCTTCATTAAGAAGAGAGGGCTTCTCATCCATTCCTGATGAGAAATGGGAAGATGTTGGCGGCCTTGATTATTTAAGGAAGGAGTTTAAAAATAGAATAATAAGGCCGATAAAATATCCTGAGGTTCATCAGGCATCTAGGTTTGCAAATCAGACGGGAATTTTACTTTTTGGGCCCCCTGGTTGTGGTAAAACCCTTATTGCCAAAGCTGTTGCCAATGAGGCAGGAGCTAATTTCATTTATATTAAGGGGCCTGAGCTCTTAAATAAATTTGTTGGAGAAAGTGAGAGAGAAATTCGACTAACGTTTAGTCGTGCAAGGGCATGTTCACCCTGTATATTATTTTTTGATGAGGTGGATGCTTTGTCAACCAAACGTGGTGCAGAAGGTGGATCAGGCATTGAGCGAGTAGTGAATCAGTTACTAATTGAGCTAGATGGTGCGGGGCAACGCCAAAATGTTTTTGTCATTGGTGCAACAAATAGGCCTGATAGGATGGATGAGGCTCTCCTCCGTCCTGGTAGACTTGGTAAACAACTTTACGTTCCTCTGCCAAGCACTGACCAGCGGTTTTCAATATTGAAAGCTCTTGCAAGGAAGCAGCCTGTTGATCCTACTGTGGATCTGAGAGCCATAGCTGAAGCGTGTGAAAATTTTAGTGGCGCTGACCTTGCTGAATTGGTGGATGAAGCAACTCGTGCTGCTCTTGATGAGAAATATACCGCAGTTGAAGAAGCTTTGACCTCAGTTGAAGCCTCTAGTGATACTTATACTTGCAAGCCAAGACATTTTGATATAGCACTTAGTCAGGTCTTTCCCTCTGTTTCTCCGGCGAAAAGGCGTAGGTATGAGCGCTTGGCAAAGCATTTTAAAGCATCATGA 2406 0.4684 MGRRNGGRSLHGTLRRRLESCMSSHSTVDDIVNHLRSTYPDYQRTKHQALTRLVQQVLEPRSKHATKVSAKRSGHDGDEESGRRALRKRQKRVDEGEERLQGDKETQGSASSSSASSLSASGSSGSEDDDGSTVSVSTSEDAKYREKYEPAVDLMKMMLRKAYTPTKDDSARKMKHVVQDKNVEMEVANSDKATNEICAKNGGGGKVKAASNLKGSVSNGDHGGGSFVKLKAGPRLSDLGGMNDLLEKLVEEVIVPWYYPELPRKLCRTPTTGILLHGPPGCGKTTLAHAIANETRVPFYPISATELVSGVSGASEENIRELFAKAYRTAPSIVFIDEIDSIASKRDNLQREMEKRIVTQLLASMDQSSRHMQSANGLDSSNVHPSYVLVIGATNRPDALDSALRRPGRFDREFXREHILSLLTRNLPLQGSLDLKYIARSTPGYVGADLAALITGACNLALKRIISKRRGEHETSYLGDWWGEPWPLEDMDKLVYTMSDFQEALKIVQPSLRREGFSSIPDEKWEDVGGLDYLRKEFKNRIIRPIKYPEVHQASRFANQTGILLFGPPGCGKTLIAKAVANEAGANFIYIKGPELLNKFVGESEREIRLTFSRARACSPCILFFDEVDALSTKRGAEGGSGIERVVNQLLIELDGAGQRQNVFVIGATNRPDRMDEALLRPGRLGKQLYVPLPSTDQRFSILKALARKQPVDPTVDLRAIAEACENFSGADLAELVDEATRAALDEKYTAVEEALTSVEASSDTYTCKPRHFDIALSQVFPSVSPAKRRRYERLAKHFKAS 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00860 802 Pfam AAA+ lid domain 716 754 IPR041569 -
Arst4g00860 802 Pfam AAA+ lid domain 433 467 IPR041569 -
Arst4g00860 802 Gene3D - 226 416 IPR027417 -
Arst4g00860 802 MobiDBLite consensus disorder prediction 64 104 - -
Arst4g00860 802 ProSitePatterns AAA-protein family signature. 663 681 IPR003960 GO:0005524|GO:0016887
Arst4g00860 802 PANTHER AAA-FAMILY ATPASE 123 801 - -
Arst4g00860 802 Pfam ATPase family associated with various cellular activities (AAA) 563 692 IPR003959 GO:0005524|GO:0016887
Arst4g00860 802 Pfam ATPase family associated with various cellular activities (AAA) 274 416 IPR003959 GO:0005524|GO:0016887
Arst4g00860 802 ProSitePatterns AAA-protein family signature. 388 406 IPR003960 GO:0005524|GO:0016887
Arst4g00860 802 FunFam ATPase, AAA family protein 521 699 - -
Arst4g00860 802 FunFam Ribosome biogenesis ATPase RIX7 226 416 - -
Arst4g00860 802 MobiDBLite consensus disorder prediction 52 141 - -
Arst4g00860 802 Gene3D - 694 778 - -
Arst4g00860 802 Gene3D - 417 515 - -
Arst4g00860 802 Pfam Nucleolin binding domain 12 59 IPR031996 -
Arst4g00860 802 MobiDBLite consensus disorder prediction 105 139 - -
Arst4g00860 802 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 236 516 IPR027417 -
Arst4g00860 802 Gene3D - 521 793 IPR027417 -
Arst4g00860 802 SMART AAA_5 559 695 IPR003593 GO:0016887
Arst4g00860 802 SMART AAA_5 270 420 IPR003593 GO:0016887
Arst4g00860 802 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 521 799 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00860 Arst-Chr4 6993890 7000584 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00860 500 800 Calmodulin-binding Proteins AT3G56690 42.345 7.65e-66 235