LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst4g00838	ATGTCCTCTGCAACATTATTAACCGAGTCCTTGCATAGTATGCACCAATCATCAGATGAAGGTGCTAAATCCACCATGGGAAGTTCCCAAATGTTCAACAATTACTATGGAATCATCACTAGTAGTAGTAGTGAGATAGTAGAGATAGAAGAAGAAGAAGAACAAGACATGAAGACATCAAAATTGTACCTTAATAATGATGCTCCTAGGACTATGTCAAGAATTAGTGAAGGGAAGAGTAGTGAGGAAGAAGAAAGTGTTTATGTAGCAGTTGGTAAGAGTGAGACAAGCATGGAAGCTCTAACATGGACTCTCAAGAACTTGGCTACTACCTCATCTACCATGCTTTATCTCATCCATGTTTTTCCTGAGATCAAACACATTCCAAATCCATTGGGAATGGGAATGATCCCAAAGAGCCAAGTGAGTGGTGAGCAAGTAGAGACCTACATGGCCCAAGAAAGAGCCAAGAGAAGACACCTCCTTCATAAGTTCCTCCAAACTTGTTCTGCTTGCAAGGTTAAGGTGGACACCATTCTCATTGAGAGTGATTTTGTTGCAAAGGCTATATTGGACTTGATCCCCATTCTTCATATTACAAAACTAGTTCTTGGACTCAACAAATCCCAATTAAGAAAACTAAGATCAAGAAAAGGGAATGGCATAGCAGATCAAGTACTTCAGAGTGCACCAGAAATGTGCAAGGTGAGAATTGTGTGTGAAGGGAAGGAAATTAGTGAAAACATAACTGGATCAGGGTTAGGTTCAGTCACCCTCTCCTTCTCCTCATGCCACTTCCATGCCCCATAA	810	0.4086	MSSATLLTESLHSMHQSSDEGAKSTMGSSQMFNNYYGIITSSSSEIVEIEEEEEQDMKTSKLYLNNDAPRTMSRISEGKSSEEEESVYVAVGKSETSMEALTWTLKNLATTSSTMLYLIHVFPEIKHIPNPLGMGMIPKSQVSGEQVETYMAQERAKRRHLLHKFLQTCSACKVKVDTILIESDFVAKAILDLIPILHITKLVLGLNKSQLRKLRSRKGNGIADQVLQSAPEMCKVRIVCEGKEISENITGSGLGSVTLSFSSCHFHAP	269

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst4g00838	269	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	87	234	-	-
	Arst4g00838	269	MobiDBLite	consensus disorder prediction	1	26	-	-
	Arst4g00838	269	Gene3D	HUPs	72	248	IPR014729	-
	Arst4g00838	269	PANTHER	U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE	40	250	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst4g00838	Arst-Chr4	6702291	6705035	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst4g00838	77	269	U-box Gene Family	AT5G65500	30.500	2.47e-15	73.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst4g00838	-		-	gmx:100777008	272.322