Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00797 ATGTGCTATTTGTTCTCTTTTAGAGTCCCGGTGGTTCCACTTCAAAGACCTGATGAGATGCAAGTTCCAAGTCCTTCCTGGATGCAAACTACTTCAGGGTATGAAGATGTGGACAGTGAACTTGGTATTCCAACAATGATTACTTGGATTTATGATGGCAAAGAAGTAGCTGTGGAGGGATCATGGGATAATTGGAAAACAAGAATGCCTTTGCAGAGATCGGGAAAGGACTTCACAATTATGAAGGTACTACCTTCCGGTGTTTATCAATTCAGATTTATTGTGGATGGACAGTGGAGGTATGCACCTGACTTGCCTTGGGCTCAAGATGATGCTGGGATTACTTACAATGTTTTAGACTTACAGGATTATGTTCCTGAAGACATTGGAAGCATTTCTGGTTTTGAACCTCCTAAATCACCAGACTCTAGTTATAACAACTTACAACTTAGTTCCGAAGATTACGCGAAGGAACCGCCATTGGTTCCTCCATTCTTGCAAATGACACTTCTTAATGTTCCTTCAACAAATATGGAAATCCAACCTCCTATATCAAGACCTCAGCATGTAGTGCTCAATCATCTGTACATGCAGAAAGGAAAGGGCAGCCCTTCAGTAGTTGCGCTCGGTACAACTCATCGGTTTCTCGCCAAATATGTCACTGTAGTGCTGTACAAGTCTTTGCAGAGGTAG 693 0.4228 MCYLFSFRVPVVPLQRPDEMQVPSPSWMQTTSGYEDVDSELGIPTMITWIYDGKEVAVEGSWDNWKTRMPLQRSGKDFTIMKVLPSGVYQFRFIVDGQWRYAPDLPWAQDDAGITYNVLDLQDYVPEDIGSISGFEPPKSPDSSYNNLQLSSEDYAKEPPLVPPFLQMTLLNVPSTNMEIQPPISRPQHVVLNHLYMQKGKGSPSVVALGTTHRFLAKYVTVVLYKSLQR 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00797 230 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 156 226 IPR006828 GO:0005515
Arst4g00797 230 Pfam Glycogen recognition site of AMP-activated protein kinase 43 122 IPR032640 -
Arst4g00797 230 Gene3D - 133 228 - -
Arst4g00797 230 SUPERFAMILY E set domains 43 128 IPR014756 -
Arst4g00797 230 SUPERFAMILY AMPKBI-like 125 227 IPR037256 -
Arst4g00797 230 SMART AMPKBI_2 138 228 IPR006828 GO:0005515
Arst4g00797 230 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 4 230 IPR043554 -
Arst4g00797 230 CDD E_set_AMPKbeta_like_N 44 120 - -
Arst4g00797 230 Gene3D Immunoglobulins 37 125 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00797 Arst-Chr4 6372402 6374596 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00797 42 123 Protein tyrosine phosphatase (PTP) family AT3G01510 30.682 5.80e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00797 K07199 - gmx:100777497 432.95