Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00796 ATGCACACTAGGTGTTTGATGCAAAGCCACAAGGTCCCGGTGGTTCCACTTCAAAGACCTGATGAGATGCAAGTTCCAAGTCCTTCCTGGATGCAAACTACTTCAGGGTATGAAGATGTGGACAGTGAACTTGGTATTCCAACAATGATTACTTGGATTTATGATGGCAAAGAAGTAGCTGTGGAGGGATCATGGGATAATTGGAAAACAAGAATGCCTTTGCAGAGATCGGGAAAGGACTTCACAATTATGAAGGTACTACCTTCCGGTGTTTATCAATTCAGATTTATTGTGGATGGACAGTGGAGGTATGCACCTGACTTGCCTTGGGCTCAAGATGATGCTGGGATTACTTACAATGTTTTAGACTTACAGGATTATGTTCCTGAAGACATTGGAAGCATTTCTGGTTTTGAACCTCCTAAATCACCAGACTCTAGTTATAACAACTTACAACTTAGTTCCGAAGATTACGCGAAGGAACCGCCATTGGTTCCTCCATTCTTGCAAATGACACTTCTTAATGTTCCTTCAACAAATATGGAAATCCAACCTCCTATATCAAGACCTCAGCATGTAGTGCTCAATCATCTGTACATGCAGAAAGGAAAGGGCAGCCCTTCAGTAGTTGCGCTCGGTACAACTCATCGGTTTCTCGCCAAATATGTCACTGTAGTGCTGTACAAGTCTTTGCAGAGGTAG 702 0.4288 MHTRCLMQSHKVPVVPLQRPDEMQVPSPSWMQTTSGYEDVDSELGIPTMITWIYDGKEVAVEGSWDNWKTRMPLQRSGKDFTIMKVLPSGVYQFRFIVDGQWRYAPDLPWAQDDAGITYNVLDLQDYVPEDIGSISGFEPPKSPDSSYNNLQLSSEDYAKEPPLVPPFLQMTLLNVPSTNMEIQPPISRPQHVVLNHLYMQKGKGSPSVVALGTTHRFLAKYVTVVLYKSLQR 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00796 233 Gene3D Immunoglobulins 40 128 IPR013783 -
Arst4g00796 233 SMART AMPKBI_2 141 231 IPR006828 GO:0005515
Arst4g00796 233 Pfam Glycogen recognition site of AMP-activated protein kinase 46 125 IPR032640 -
Arst4g00796 233 CDD E_set_AMPKbeta_like_N 47 123 - -
Arst4g00796 233 Gene3D - 136 231 - -
Arst4g00796 233 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 4 233 IPR043554 -
Arst4g00796 233 SUPERFAMILY AMPKBI-like 128 230 IPR037256 -
Arst4g00796 233 SUPERFAMILY E set domains 46 131 IPR014756 -
Arst4g00796 233 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 159 229 IPR006828 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00796 Arst-Chr4 6372402 6375072 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00796 45 126 Protein tyrosine phosphatase (PTP) family AT3G01510 30.682 8.58e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00796 K07199 - gmx:100777497 430.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g03711 1 98372496 98375413 Arst4g00796 4 6372402 6375072 PCT