Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00780 ATGGAAATCCAATTTTCCTACGTAATCATCATCTCTATCCTCTTTGCAACAACCCTATGGCTAACAAAGAACCTAAAACAAAATAGCCATACCCAGAAACTTCCACCAGGACCATGGAAGCTCCCTCTCATAGGAAACCTCCATCAACTAGCATCAGCAGGTTCACTTCCACACCATGCTCTCCAAAATCTATCACTCAAATATGGCCCCATCATGCACCTTAAACTAGGCCAAGTTTCTGCTGTAGTTGTTTCATCTTCAGATGTTGCAAAAGAGATTATGAAAACACATGATCATGCTTTTCTCCAAAGGCCAGAGTTTCACTCTGTTGCAATCTTCACCTATGGTTCAAAAGATGTTGCTTTTGCCCCATATGGTGATTATTGGAGACAAATTAGGAAAATGTGCACTTTAGAGCTTCTAAGTTCCAAGAGGGTTCAATCTTTTGCCTTCATAAGGGAGCAAGAAGTATGTAACCTCATAGAATCTATTCATTCATGTGTAGGTTCTGAAGTTAATGTTAGTGAGAAAGTGTTTTCCATGGTTAGCACAACAGTTTCAAGGGCAACGTTTGGTAACAAAACTAAGGACCATGAAGAGTTTGTAGGTGTGGTTAAAGAAGTGGCGAAGATGACTGGAGGGTTTGACTTGGTTGACTTGTTTCCTTGCCTTAAAGTTGTGACAATGGACAAGGCGAAAATGGAGCTGCAAAAGAAGCAGGACTTGATCTTGGAGAATATTATCAGAGAGCATAAAGTGAATTTGAAGATGAGATCCAAAGAAGGCATGGTGGTGGGAGAAAAAAGGCATGAAAACTTGATCGATGTTCTGCTCAGGATCCAACAAAGTGGAGATCTTCAAGTTCCACTTACAGATGACAGTATTAAAGCAATAATTTGGGACATGTTTGCGGCAGGGACCGATACTTCATCAACAGTACTAGAATGGACAATGATGGAATTGATGAGAAACCCATCAGCAATGAAGAAGTTACAAGCTGAAATCAGAGGAAGGGAAACACTATTACGTGAGCATGACGTGGAAGAACTTGTTTACCTAAAGTCAGTAATCAAAGAAGCATTAAGATTACACGCTCCAGTTCCTCTGTTGCTTCCAAGAGAATGCACTGAAGCAACCAAGGTTAATGGCTACGATATTCCGAAGAAGGCGAAAGTGATAGTAAATGCATGGGCGATAGGGAGAGATCCTAAACACTGGGATGATGCGTTGAGCTTCAAACCGGAAAGGTTCCATGGCAGTTGTGTTGATTTCAGAGGATCGAATTTCGAGTACATTCCGTTTGGCGCCGGAAGAAGAATGTGTCCAGGAATTTCCTTTGGTTTATCAAATGTTGAGTATGCTTTGGCTAAGTTGCTTTACCACTTCAATTGGCAAGTTCCAAAAGGAATCAAAGCACAGGATTTAGATGTCAGTGAAACATTTGGATCTGTGTCTGGAATTAAGAACAGTCTTTTCTTGGTTCCCACTCCATATATATCATGA 1503 0.4085 MEIQFSYVIIISILFATTLWLTKNLKQNSHTQKLPPGPWKLPLIGNLHQLASAGSLPHHALQNLSLKYGPIMHLKLGQVSAVVVSSSDVAKEIMKTHDHAFLQRPEFHSVAIFTYGSKDVAFAPYGDYWRQIRKMCTLELLSSKRVQSFAFIREQEVCNLIESIHSCVGSEVNVSEKVFSMVSTTVSRATFGNKTKDHEEFVGVVKEVAKMTGGFDLVDLFPCLKVVTMDKAKMELQKKQDLILENIIREHKVNLKMRSKEGMVVGEKRHENLIDVLLRIQQSGDLQVPLTDDSIKAIIWDMFAAGTDTSSTVLEWTMMELMRNPSAMKKLQAEIRGRETLLREHDVEELVYLKSVIKEALRLHAPVPLLLPRECTEATKVNGYDIPKKAKVIVNAWAIGRDPKHWDDALSFKPERFHGSCVDFRGSNFEYIPFGAGRRMCPGISFGLSNVEYALAKLLYHFNWQVPKGIKAQDLDVSETFGSVSGIKNSLFLVPTPYIS 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00780 500 SUPERFAMILY Cytochrome P450 35 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst4g00780 500 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst4g00780 500 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst4g00780 500 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst4g00780 500 PANTHER OS08G0105600 PROTEIN 59 498 - -
Arst4g00780 500 CDD CYP71-like 67 491 - -
Arst4g00780 500 FunFam Cytochrome P450 99A2 24 496 - -
Arst4g00780 500 Gene3D Cytochrome P450 27 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst4g00780 500 Pfam Cytochrome P450 35 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst4g00780 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Arst4g00780 500 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst4g00780 500 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst4g00780 500 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst4g00780 500 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst4g00780 500 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst4g00780 500 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst4g00780 500 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst4g00780 500 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Arst4g00780 500 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00780 Arst-Chr4 6224886 6228072 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00780 8 496 Cytochrome P450 AT5G24950 40.316 1.53e-125 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00780 - K15472 gmx:100794503 604.364