Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00763 ATGGTTTCGCTGGAGGAATCTGGCTCCAACAACACTAACCGTTTTCCGTTGGAGAGGAGCTACCACTCCGTGTCGGCGATTTCTCCCAAAACGCACCGTCGTATAGGGAGGTCTATGCGAACCATACGCTCCAACTTTTTTCAAGACGATAACAGCAGCAACAGTTGCTACTCTTTTACTGAGAAATCCACGTGCTTATCGGAGAACCTCTCCGACTCCGTCGTCGACCTCCGCCTCGGCGAGCTCGCCTCCAGGAACGTCATCAAGCCTACTTCACCCGTCCCCGATGAGGAACTTCTTGACCTCTCGCACGCCTTCAGTGACTTCTCCGCCTGCAGCAGTGACATCTCCGGTGAACTCCAGCGCCTCGCATGCTTACCTTCGCCGGAATACGTCCAGAAGAGCAACGACGCTGGCAACGGAGGTAACCAGGAACAGGAGACGGAGCCAGAGCCTTGCGTAGGGTTCTTGCAGAGGGAGAATTTCTCCACGGAGATCATCGAGAGCATCTCGCCGGAGGATCTTCAGCCAACAGTGAAGCTCTGCATCGACGGCCTCCAGTCGCCGTCGATCGCCGTGAAGCGATCGGCAGCCGCCAAGCTCCGTCTCTTAGCGAAGAATCTGAAGTCGCTGATCTACGTGCTCAAGACAGGAACAGAAACCTCGAAGCAGAACGCAGCGTGTGCGCTTCTCAGCTTAGCGCTTGTGGAGGAGAACAAGAGCTCGATCGGCGCATCCGGCGCGATTCCGCCACTGGTGTCGCTGCTGATGAACGGCTCCAGCCGCGGGAAGAAGGACGCGCTGACGACGCTGTACAAGCTGTGCTCGGTGAAGCAGAACAAGGAGCGGGCAGTGAGCGCCGGCGCGGTGAGGCCTCTGGTAGAGCTTGTGGCGGAACAGGGGTCTGGCATGGCGGAGAAGGCTATGGTAGTGCTGAACAGCCTAGCAGCTATTCAAGAAGGAAAAGACGCAATCGTGGAGGAAGGTGGAATCGCTGCTCTGGTTGAAGCGATCGAAGATGGTTCGATGAAGGGAAAGGAGTTCGCCGTATTAACGCTTCTTCAGCTGTGTAGTGAGAGTGCTATCAACCGAGCGTTTCTTGTGAGGGAAGGCGCCATTCCTCCTCTCGTTGCTCTTTCCCAGTCCGGTACTGCTCGAGCTAAGCACAAGGCTGAAACACTCCTTCGATATTTGAGAGAATCAAGACAAGAAGCATCCTCTTCAAGTTCTTAA 1233 0.5564 MVSLEESGSNNTNRFPLERSYHSVSAISPKTHRRIGRSMRTIRSNFFQDDNSSNSCYSFTEKSTCLSENLSDSVVDLRLGELASRNVIKPTSPVPDEELLDLSHAFSDFSACSSDISGELQRLACLPSPEYVQKSNDAGNGGNQEQETEPEPCVGFLQRENFSTEIIESISPEDLQPTVKLCIDGLQSPSIAVKRSAAAKLRLLAKNRXKSLIYVLKTGTETSKQNAACALLSLALVEENKSSIGASGAIPPLVSLLMNGSSRGKKDALTTLYKLCSVKQNKERAVSAGAVRPLVELVAEQGSGMAEKAMVVLNSLAAIQEGKDAIVEEGGIAALVEAIEDGSMKGKEFAVLTLLQLCSESAINRAFLVREGAIPPLVALSQSGTARAKHKAETLLRYLRESRQEASSSSS 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00763 411 FunFam U-box domain-containing protein 4 265 406 - -
Arst4g00763 411 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 289 331 IPR000225 GO:0005515
Arst4g00763 411 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 248 290 IPR000225 GO:0005515
Arst4g00763 411 Gene3D - 118 410 IPR011989 -
Arst4g00763 411 SMART arm_5 319 359 IPR000225 GO:0005515
Arst4g00763 411 SMART arm_5 237 277 IPR000225 GO:0005515
Arst4g00763 411 SMART arm_5 278 318 IPR000225 GO:0005515
Arst4g00763 411 SMART arm_5 361 401 IPR000225 GO:0005515
Arst4g00763 411 Pfam Armadillo/beta-catenin-like repeat 239 277 IPR000225 GO:0005515
Arst4g00763 411 PANTHER U BOX DOMAIN-CONTAINING 211 400 - -
Arst4g00763 411 SUPERFAMILY ARM repeat 211 405 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00763 168 404 U-box Gene Family AT5G67340 42.955 1.15e-55 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00763 - - gmx:100818658 576.63