Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Arst4g00743 | ATGCCCATCACTCAAACCACGACTGCAGATAGTGTTTTCCAACTCCAACGCGCCAACCACTCCTCCAAGCGGAAGCTCGATGACTACGGTGATGAATATGGGGCAGATGCCGGCGCGGATTTCGCCGGCGGCGACCCCGAGGTCGCCTATGCAGCGGGATTCCTTGCCGGGATTAAGCGAGAAGAGACGAAAAACGCCTCAAATTCGCGGTACCGTGGCGCGGATGCTAGGGTTTCGTCGTCGACTCCTTCTTCGTCGCGAGCCGCTCAGTATCGGAGCGGGTCGAGGTCCGGGTCGCGGTTACAGTTCTTCGTCCGAATGATGTCGCGAGGGAACACTGTGGTGATGCAAGCATCTCCTCACGATACCGTGAAATCGATCCACGAGAGAATCATGGTATTGACCGGTATACCTGTTTTCGAGCAGGGTTTAACATACAGAGGCAAACAACTCCAGTGGGAGAACACTCTTCAAGAGTGTGGGGTTCAGAACGACGCAAACCTCCACCTGGTTGGTCGCATGAGGAGTACGGAGCACCCTCAGGCGTGGCAGGTTCTTGAAAACATGGTCAGTCTTGTTTTCAGGCTCTGTAGAGGCGAAATTGTTCACGAGGCTACCAAGGTGATCAAGAGCCTCATCACCAGTTACATGAACATGGCGCCCAAGGTTGATGATGCTACAGCATCTTATTTCCACATTTTCATCGCCTCGAATGCCCCTTCCATGCTGGTAACTCTTTATGTTTCTCCTTATGCTGGTAACAAGGAACGTGGTGATTTATTTGTCAGGCATTTCTTGAATTCTTGTCGCAATAACATGGCTAAACCTTATCACGGTCAGTGTGCGAGTGTGGTGTTGGAGTTGTGTAGTTTGCTTATGAGGGTTGGGTGTGATGATCCTCTGTATCTGCATTGCCGGAATACTTTGGGGTCTATGTTAGAGAGTGCTGGTTGTTGCCATGTTTATGCAGGTAAGCATGGTAAAGGTGGAGGGTCTATTTTGTTGCAGGATATCTGCCCCTTTGTTCGTGAGCTTTCGAATAGGTTGTTGAGGGATTTGGAGTTATGCATCCAGCGCCCCAACAGTTCGGGGCCATTGCAGACCGATGTTTCGGACTTTGCAGCTTTCTTGACCCCTTTGAGGAAAGGAATTACCCAATTGCAAGCTATGAGGGGTATGGGGTTGGATGAAAAGTGCCATGAGGGGATCTTGCTTGCAGAAGAAGTGGATTACCTTCACCTTATATTTATTCAAATGTTGGAGAAAATGGAACAATGCCTTCGTTCTATGCAGGAATTCTTGTCTGACAAACTAAGACGGGATCGGGATGTGGGTTTGACGTATTCTGGATGTTCTCAATATCTTTCTATCTTGAAGGAATTGTATCAAATCTCCAAGCTATATGATGGGGCGGAGGAAAAATTTTGGAAGGTTTTGATGAATCAACGAAGTATGCTTTGTATACTTGTCATCCAATATGCAAAGAGAAGTGATGATCACCAGTGGATTCTTGATCACAGATCTGTGACTAATTTTGAGGTGAGGAGGCATCTGGCAATGCTGTTGTTTCCTGATGTCAAAGAAGACTATGAGGAGTTACATGAGATGCTTATTGATAGGTCTCAATTATTGGCCGAATCCTACGAGTATATAGCACAAGCAAAGCCTGCATCTCTGCATGCTGGGCTATTTATGGAATTCAAAAACGAGGAAGCTACTGGACCGGGTGTGCTGAGGGAATGGTTTCTTTTGGTGTGTCAAGCAATATTTAATCCAGAAAATGCTCTTTTTGTAGCATGCCCAAATGATTGCAGGAGATTTTACCCTAATCCTGCATCTAAGGTAGATCCTCTGCATCTAAAGTACTTCAGTTTTGCTGGTCGTGTTATTGCATTAGCTTTAATGCATAAGGTGCAAGTGGGTATTGTTTTTGACCGTTTGTTTTTCAAGCAATTGGCTGGAAAGTCTGTTACTTTAGAAGATATACAGGCGGCAGATCCTTACTTGTACAGTAGCTGCAAGCAAATATTGGAGATGGATGCTGATTTCATTGATTCAGATGCTTTAGGACTGACGTTTGTGAGAGAGGTGGATGAATTAGGACACAGGAAAGTGGTTGAACTTTGCTCTGGTGGGAAAAACCTTGTAGTGAATAGTAAGAACAGGGAGAAGTATGTTTCTCTTCTCATTCAAAATTATTTTGAGACATCAATTTCTGAGCAGGTATCACATTTTGCCAAGGGTTTTGGTGATATCCTTTCTAACTCAAGGCAACAGCCGTTCTTCTTTAAAAGTTTAGAGCTTGAAGACCTTGATTGGATGCTCCATGGGAGCGAAAGTACTATTTCTGTCGAAGATTGGAAGGCGCATACTGAGTATAATGGCTATAAAGAGACTGACTGTCAAATATCATGGTTTTGGGAGATTGTTGGTAGAATGCCAGCAGAACAACGGAAGATACTTCTGTTCTTTTGGACATCCGTGAAATATCTGCCAGTTGAAGGTTTCCGCGGTTTAGCTTCCCGTCTATACATTTACAGGTCTATGGAAACTGAAGACCGCCTTCCTTCATCGCACACATGCTTTTACAGGCTGTGTTTCCCGCCATATTCATCCAAGGCTGTCATGCAAGATCGCCTTAGAATCATCACTCAAGAACACATCGGTTGCAGTTTCGGTACCTGGAACCTTAAATTGGTCACTGCCTCCCTTCACCTTCGTAGATCAGAGGATTACAACATGCTGCTACACCACAGCCTGTAG | 2763 | 0.4549 | MPITQTTTADSVFQLQRANHSSKRKLDDYGDEYGADAGADFAGGDPEVAYAAGFLAGIKREETKNASNSRYRGADARVSSSTPSSSRAAQYRSGSRSGSRLQFFVRMMSRGNTVVMQASPHDTVKSIHERIMVLTGIPVFEQGLTYRGKQLQWENTLQECGVQNDANLHLVGRMRSTEHPQAWQVLENMVSLVFRLCRGEIVHEATKVIKSLITSYMNMAPKVDDATASYFHIFIASNAPSMLVTLYVSPYAGNKERGDLFVRHFLNSCRNNMAKPYHGQCASVVLELCSLLMRVGCDDPLYLHCRNTLGSMLESAGCCHVYAGKHGKGGGSILLQDICPFVRELSNRLLRDLELCIQRPNSSGPLQTDVSDFAAFLTPLRKGITQLQAMRGMGLDEKCHEGILLAEEVDYLHLIFIQMLEKMEQCLRSMQEFLSDKLRRDRDVGLTYSGCSQYLSILKELYQISKLYDGAEEKFWKVLMNQRSMLCILVIQYAKRSDDHQWILDHRSVTNFEVRRHLAMLLFPDVKEDYEELHEMLIDRSQLLAESYEYIAQAKPASLHAGLFMEFKNEEATGPGVLREWFLLVCQAIFNPENALFVACPNDCRRFYPNPASKVDPLHLKYFSFAGRVIALALMHKVQVGIVFDRLFFKQLAGKSVTLEDIQAADPYLYSSCKQILEMDADFIDSDALGLTFVREVDELGHRKVVELCSGGKNLVVNSKNREKYVSLLIQNYFETSISEQVSHFAKGFGDILSNSRQQPFFFKSLELEDLDWMLHGSESTISVEDWKAHTEYNGYKETDCQISWFWEIVGRMPAEQRKILLFFWTSVKYLPVEGFRGLASRLYIYRSMETEDRLPSSHTCFYRLCFPPYSSKAVMQDRLRIITQEHIGCSFGTWNLKLVTASLHLRRSEDYNMLLHHSL | 920 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Arst4g00743 | 920 | CDD | HECTc | 534 | 893 | IPR000569 | GO:0004842 | |
| Arst4g00743 | 920 | Gene3D | Hect, E3 ligase catalytic domain | 655 | 737 | - | - | |
| Arst4g00743 | 920 | FunFam | E3 ubiquitin-protein ligase UPL5 | 779 | 894 | - | - | |
| Arst4g00743 | 920 | ProSiteProfiles | HECT domain profile. | 555 | 895 | IPR000569 | GO:0004842 | |
| Arst4g00743 | 920 | PRINTS | Ubiquitin signature | 112 | 132 | IPR019956 | - | |
| Arst4g00743 | 920 | PRINTS | Ubiquitin signature | 133 | 153 | IPR019956 | - | |
| Arst4g00743 | 920 | PRINTS | Ubiquitin signature | 154 | 175 | IPR019956 | - | |
| Arst4g00743 | 920 | Pfam | Ubiquitin family | 104 | 175 | IPR000626 | GO:0005515 | |
| Arst4g00743 | 920 | SUPERFAMILY | Ubiquitin-like | 102 | 189 | IPR029071 | - | |
| Arst4g00743 | 920 | SMART | ubq_7 | 101 | 173 | IPR000626 | GO:0005515 |
Showing 1 to 10 of 20 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Arst4g00743 | - | - | aip:107638691 | 1812.35 |
Showing 1 to 1 of 1 entries