Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00704 ATGAGTCAACTCGGCGATATTCTTCAGACGGAGCCAAGGACGATTCTCGGATTGTTGACGGAGCAAATGGACGCCGCCGCCGATGGACCGCCACGCACCAGGACCAGGCGCACCTTCAAGGACCGTTTAGGATTCATCGGCATCGGCTGTTGCGGTGCCACGTGGCGATTCCGTTCTGAGTCCATAACGGTCAGGCACGAAGACCAAGAACAACAGCAACAACCACAGCAACAGCATCAACAGCACCAACCGCTTCTTCTTGAAACGAATCAGGCTCGAGATCCGAACCGTTTTGGACCTGACTGCGTGTCTCCGACTCCTGCCAGTTCCGGTATGAACCTTGCGGCGGCGTTAGCGGCTGAGCGGCAGCTCCGGGGGACGCCGCAGGAGGCGGAGGGAGGTGAGAGAAGAGGTGCGTGGAGGGTGTCGCTGATGAGGCTGCTAGAGGAGACCGACGGCGGCGATGCAGAGGTTAGTTCGGCGGCGAAGACATCGGATGAAGATAAGATAAGTGGTAGTGGTGGTGGTGGTGTGGGAAATGATTGGGTGTGCTGCGTGTGCATGGGGAGGAAGAAAGGCGCGGCGTTCATACCATGTGGTCACACTTTTTGCAGGGTTTGTTCAAGGGAGCTGTGGCTCAACCGAGGCTCTTGTCCCCTTTGCAATCGTTCCATTCTCGAGATTCTCGACATTTTCTGA 699 0.5694 MSQLGDILQTEPRTILGLLTEQMDAAADGPPRTRTRRTFKDRLGFIGIGCCGATWRFRSESITVRHEDQEQQQQPQQQHQQHQPLLLETNQARDPNRFGPDCVSPTPASSGMNLAAALAAERQLRGTPQEAEGGERRGAWRVSLMRLLEETDGGDAEVSSAAKTSDEDKISGSGGGGVGNDWVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILDIF 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00704 232 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 178 231 IPR013083 -
Arst4g00704 232 SUPERFAMILY RING/U-box 180 229 - -
Arst4g00704 232 CDD RING-HC 184 221 - -
Arst4g00704 232 Pfam Zinc finger, C3HC4 type (RING finger) 183 226 - -
Arst4g00704 232 ProSiteProfiles Zinc finger RING-type profile. 184 222 IPR001841 -
Arst4g00704 232 MobiDBLite consensus disorder prediction 152 174 - -
Arst4g00704 232 MobiDBLite consensus disorder prediction 68 83 - -
Arst4g00704 232 PANTHER OS01G0917900 PROTEIN 4 232 - -
Arst4g00704 232 SMART ring_2 184 221 IPR001841 -
Arst4g00704 232 MobiDBLite consensus disorder prediction 64 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00704 Arst-Chr4 5244434 5245687 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00704 15 232 C3H Transcription Factor Family AT4G22250 49.776 9.68e-58 180
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g00704 4 5244434 5245687 Arst4g00704 4 5244434 5245687 ECH
Arst1g03649 1 97797887 97798865 Arst4g00704 4 5244434 5245687 PCT