Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00667 ATGGCACTAATGCAGCGCCTAGCTAGAACAGCACGCCCCCTCCGAACCCTAACCTCTCGCCCCCTTTCCCCTCACAAATCAGCACTTGCTTCATTCGCCGTGCCTCGAGTTTTGGGATCCGGACCCTCACGTGACGATGACTATCAGGCACCGTATTCGTTGCTTCCGGCTGTGTTAGCTGGCGCTTTCGGAATTGGATTGGCGGAGACGGTGTATGCTGATGCCGGTCGCGGTGGCGTTGGCGGCGCTGAGGATGTGCACGCTGTTGCGAAGAAAGAACGCGAGCGCATTGAGGAGTTGCTTAGGAAGAAAGGAGTTCGTTATGGTTCTTATCCTCGCTTCACTGTTGCTGTTAAAGGACAAAAGGTCAGCGTTAAGTTTCAAATACCTCCTGCCTGTGAAGTCCCGCAACTTATTGCAAATCTCGCAACAAATCTTGGACTGAAAGCTGAAGGGAACGGAGGTGGATCGGATATGCTATTGCGATCTTGGGACAGCACAGTGGCTTGGCAGCTTGCCCTTACTCATCCGTCCAAGAAAAAGCATATTGAAGGGGATGATCCATCTTCAATAGATATGAATGGACATGATGGAGATCTTTGCATACTCTTTTTTCATTCTCTCATTGGCTCAGATAAAGCTGAAATTGAACTTATTAAGCAAGGGAACTTGAGTCCTGAAGAGCTTGATGCTTTCGTCTCTGTTTTACAATTAGCTGGTAGCAAGATGGGACAAAGAAGTGCCCCCCTGGAAAGGAAGTCAAGGGAAGAGACTGAACAGTCGCCATCTGTAGATAAATCTATTTCTAGTCTTGAGGCCATGGGACTGAGAATTTATGGATTGAATGAACCCATTGGTATATCAAATGGTGAGGTATCATGGGACAACATTGCTGGATATGAACATCAAAAACGAGTAATAGAAGATACAATACTGTTGGCTTTGCATAGTCCTGAAGTATATGACAATATTGCACGAGGGACTCGTCAAAAGTTTGAATCAAACCGGCCTCGAGCTGTGCTGTTTGAAGGTCCACCAGGTACAGGGAAAACTTCTTGTGCTCGCGTTATTGCCAATCAAGCAGGTGTCCCTTTGTTATATGTTCCACTTGAGGCTGTAATGTCTGAATACTACGGTAAAAGTGAACGCCTTCTGGGAAAAGTGTTTTCACTTGCAAATGAACTTCCTAATGGTGCTATTATATTTCTGGATGAGATTGATTCTTTTGCTGCTGCTCGGGATAATGAAATGCATGAAGCTACAAGGAGAATATTGTCAGTGTTGTTACGACAGATAGATGGCTTTGAGCAGGATAAGAAAGTGGTCGTGATTGCTGCTACCAATAGAAAGGAAGACCTTGATCCTGCATTAATCAGCCGATTTGATACTATGATCCCTTTTGGCTTACCTGATCACCGTAATCGTCAGCAAATAGCATCCAAATATGCAAAGCACCTAACCAAACCTGAACTAGATGAACTTGCCAGAGCTACAGAAGATATGTCCGGAAGAGACATTCGTGATGTTTGTCAGCAAGCAGAACGATCATGGGCATCAAAGATTATTCGAGGGCAAGTATCCAAAGATGGTGAACAAGAAAGTCTTCCACCTTTGCAAGAGTATATAGAGTGCGCCACAATTCGGCAAAACTCACTGCTCAGTGCTGCTGCTGGCAGGAATTTCCGAAATTTTCCCCATCTTAGGATGGCAACCGACTGA 1719 0.4549 MALMQRLARTARPLRTLTSRPLSPHKSALASFAVPRVLGSGPSRDDDYQAPYSLLPAVLAGAFGIGLAETVYADAGRGGVGGAEDVHAVAKKERERIEELLRKKGVRYGSYPRFTVAVKGQKVSVKFQIPPACEVPQLIANLATNLGLKAEGNGGGSDMLLRSWDSTVAWQLALTHPSKKKHIEGDDPSSIDMNGHDGDLCILFFHSLIGSDKAEIELIKQGNLSPEELDAFVSVLQLAGSKMGQRSAPLERKSREETEQSPSVDKSISSLEAMGLRIYGLNEPIGISNGEVSWDNIAGYEHQKRVIEDTILLALHSPEVYDNIARGTRQKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLLYVPLEAVMSEYYGKSERLLGKVFSLANELPNGAIIFLDEIDSFAAARDNEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKEDLDPALISRFDTMIPFGLPDHRNRQQIASKYAKHLTKPELDELARATEDMSGRDIRDVCQQAERSWASKIIRGQVSKDGEQESLPPLQEYIECATIRQNSLLSAAAGRNFRNFPHLRMATD 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00667 572 Coils Coil 83 103 - -
Arst4g00667 572 Pfam ATPase family associated with various cellular activities (AAA) 340 468 IPR003959 GO:0005524|GO:0016887
Arst4g00667 572 MobiDBLite consensus disorder prediction 248 262 - -
Arst4g00667 572 Gene3D - 291 469 IPR027417 -
Arst4g00667 572 ProSitePatterns AAA-protein family signature. 441 460 IPR003960 GO:0005524|GO:0016887
Arst4g00667 572 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 263 514 - -
Arst4g00667 572 MobiDBLite consensus disorder prediction 244 267 - -
Arst4g00667 572 Gene3D - 470 531 - -
Arst4g00667 572 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 291 520 IPR027417 -
Arst4g00667 572 CDD RecA-like_protease 325 467 - -
Arst4g00667 572 SMART AAA_5 336 471 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00667 Arst-Chr4 5080790 5087213 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00667 336 536 Calmodulin-binding Proteins AT3G56690 36.364 1.49e-27 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00667 - - gmx:100803362 832.017