Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00662 ATGTCCAATGATGAAAAAAAAAATCAGATTTGCCAAGTCTTGATTGCAATGCAGAGGGGTGATAACTTAAGGGCCGAGGATTATATGCTTTTTGACCCTTTCATATATCATGGGATGGCTGAACTGCATGACAAGCACAGAGAAATGCGCCTTGGTGTTGATAACACGTCTTATGAGGAATTGTTGGCATTGGAGGAGCGAATTGGAGATGTCAGCACTGGATTGAGCGAGGATGTCATTATGAAGTCGATGAAACAGCAAATATACATGTCTGTTATGGCGGAGTCTTCTACAGATCTTGAGCCTTGTTGTATCTGTCAGGTAAGAGTTATGGTCTCAGCTAATTAA 348 0.4138 MSNDEKKNQICQVLIAMQRGDNLRAEDYMLFDPFIYHGMAELHDKHREMRLGVDNTSYEELLALEERIGDVSTGLSEDVIMKSMKQQIYMSVMAESSTDLEPCCICQVRVMVSAN 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00662 115 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 24 108 IPR045191 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00662 Arst-Chr4 5012412 5014377 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00662 8 107 C3H Transcription Factor Family AT2G15530 66.019 4.00e-43 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00662 - K19041 adu:107482974 233.032