Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00660 ATGAGCAGAAAGCCAAACGCAAGAAAACAGCAGCATGTTCCATTGATTGATCTCCTTATTCTCTGTTACCTTCTCTTATTCACTGCCACAACCACAAAATCCGAAGCTAAATGCAGTTCTGGGTGCAACCTTGCACTAGCTTCCTACTACCTATGGCCAGGAACAAACCTCACTTACATCACCACCATCTTCGGAAAACCACAGTCAGAGATTCTGAAATACAACCCTGAAATAAAAAACCCAGATTCCATTGATAAGCAAGAAAGGATCAACGTTCCCTTCTCATGTGACTGCTTGAACGGTGATTTCTTAGGTCACACTTTTTCATACGAAACACATCACGGTGACACGTACAATAACATTGCTCATGTTGCTTTCTCAAACCTCACAACTGAGGAGTGGCTAAGTAGGGTTAATAGCTATCCAGCTTTAAACATTCCTGATGGTGTTCAGATCAATGTAACTGTAAATTGTTCATGCGGAGATATACATGTGTCTAAGGATTATGGATTGTTTGCCACGTATCCCCTTAGGATCGGCCAGGATTTGAAGACGGTGGCGGCCGAATCCGCCGTGCCGGCCGAGTTGCTGCAGAGGTACAATCAGGGCTCTGATTTTGGTGCCGGGAATGGGATTGTTTTTGTGCCGGCCAAAGATGAAAATGGAAAGTTTCCGCCACTGCCATTGGGATCAGGAATCTCTGGTGGAGCCATTGCTAGCATTATTGGAGGTGCTGTTGCTGGATTATTACTATTGGCACTTGTTCTCTATTTTGCTCTATTTAGAAGAAAGAAAGTGGTGGCTGAGGTGTCCCTTCTCCCTCATGATCAATTTACTCAACTCCAACATGGTTGTGGAAGCAGGTTGAGTAAGGGATCAGAATCTTCCCCTGTGATTTCGCCAAGGTTGACCGGTATTACAGTTGACAAGTCAGTGGAGTTCTCATATGAAGAGTTGGCCAAAGCTACTAATGACTTTAGCATAGCTAACAAAATTGGTCAAGGTGGTTTTGGTTCTGTATACTATGCAGAGCTTAGGGATGAGAAAGCGGCAATTAAGAGAATGGATATGCAAGCATCAAAAGAATTCCTTGCTGAACTCAAGGTTCTAACACACGTCCATCACTTGAACTTGGTGCGTTTAATAGGATACTGTGTTGAAGGCTCCTTATTTTTGGTTTATGAATACATTGAGAATGGCAATCTAAGTCAACATTTGCGTGGCTCAGGGAGGGATTCATTATCATGGCCTATTAGAGTTCAAATTGCACTGGATTCAGCAAGAGGACTGGAATACATTCATGAGCATACAGTTCCTGTCTATATCCATAGAGATATTAAGTCAGCAAACATTTTGATAGACAAAAACTTTCGCGGAAAGGTTGCAGATTTTGGTCTAACAAGATTGACTGAATATGGTAGCTCTTCATTACAGACACGTCTTGTTGGTACATTTGGCTATATGCCTCCAGAATATGCACAGTATGGTGAAGTTTCCCCCAAAATAGATGTATATGCTTTTGGTGTTGTTCTCTATGAACTCATATCCGGAAAGGAAGCTATTATCAAGACAAATGAGATTGTGACTGAATCAAAAGGGCTAGTTGCCTTGTTTGAAGAGGTTCTTAGTCAAACAGACCCAAAAGAAGATCTTTCAAAATATGTTGACCCTAGACTTGGTGACAACTACCCTGTTGACTCTGTATTTAAGATGTGTCAACTTGCTAGAGCATGCACACATGAAAATCCTCAACTAAGGCCAAGCATGAGATCAATTGTGGTAGCATTAATGACACTTTCGTCAGCAACTGAGGATTGGGATGTTGGCTCTTTCTATGAAAACCAAGCTTTGGTGCATCTAATGGCTGGAAGGTAG 1875 0.4208 MSRKPNARKQQHVPLIDLLILCYLLLFTATTTKSEAKCSSGCNLALASYYLWPGTNLTYITTIFGKPQSEILKYNPEIKNPDSIDKQERINVPFSCDCLNGDFLGHTFSYETHHGDTYNNIAHVAFSNLTTEEWLSRVNSYPALNIPDGVQINVTVNCSCGDIHVSKDYGLFATYPLRIGQDLKTVAAESAVPAELLQRYNQGSDFGAGNGIVFVPAKDENGKFPPLPLGSGISGGAIASIIGGAVAGLLLLALVLYFALFRRKKVVAEVSLLPHDQFTQLQHGCGSRLSKGSESSPVISPRLTGITVDKSVEFSYEELAKATNDFSIANKIGQGGFGSVYYAELRDEKAAIKRMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSQHLRGSGRDSLSWPIRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFRGKVADFGLTRLTEYGSSSLQTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISGKEAIIKTNEIVTESKGLVALFEEVLSQTDPKEDLSKYVDPRLGDNYPVDSVFKMCQLARACTHENPQLRPSMRSIVVALMTLSSATEDWDVGSFYENQALVHLMAGR 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00660 624 Gene3D Transferase(Phosphotransferase) domain 1 397 608 - -
Arst4g00660 624 CDD STKc_IRAK 332 593 - -
Arst4g00660 624 Pfam Protein tyrosine and serine/threonine kinase 328 595 IPR001245 GO:0004672|GO:0006468
Arst4g00660 624 SMART serkin_6 326 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g00660 624 FunFam PTI1-like tyrosine-protein kinase 3 397 610 - -
Arst4g00660 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Arst4g00660 624 ProSiteProfiles Protein kinase domain profile. 326 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g00660 624 FunFam LysM receptor kinase 2 305 396 - -
Arst4g00660 624 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 23 610 IPR044812 GO:0019199|GO:0045087
Arst4g00660 624 Gene3D Phosphorylase Kinase; domain 1 311 396 - -
Arst4g00660 624 SUPERFAMILY Protein kinase-like (PK-like) 301 596 IPR011009 -
Arst4g00660 624 ProSitePatterns Protein kinases ATP-binding region signature. 332 353 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00660 Arst-Chr4 4912200 4918624 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00660 13 624 Receptor kinase-like Gene Family AT3G21630 57.532 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Arst4g00660 PK_Tyr_Ser-Thr 4.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00660 - K13429 gmx:100802308 888.641