Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00649 ATGGACTACTACTGGACTAGAGGTCACACCCTCGGCCGGGGATCCACAGCCACCGTCTACACTGCTGAATTTCATGGGTCTGGTGAACTCTTTGCCGTGAAGTCAGCGGAGGTACACCGGTCTGAGGAGCTGCGGAAAGAACAGGGTCTTCTTTCATCGCTCAATTGTCCTCAGATTGTCAAGTACAAAGGGTACGATGTTACGTACGAGGATGGTCGGTACTTTTACAACCTCTTCTTGGAATACGCGCCAAGGGGGACCCTGCTTGACGTAATTGCCCATTACAATCACGGCGGTGCCACCATGGAACACTCATTGGCAAGTGTCTACACGCGCCAGATTCTGTTGGGACTCAACTATCTTCATTCCAATGGGATAGTACATTGCGATGTAAAAGGGCAGAACGTTCTCATCACCCAACATGGCGCCAAAATCGCCGACTTTGGTTGTGCCCGCAAAGTTGGCTCCGGCGCCGGCGGACGAGGAGGGGTTATCGCTGGAACGCCGGCGTTCATGGCGCCGGAGGTGGCGCGTGGGGATGAACAGGGATTCCCAGCTGACGTGTGGGCCCTGGGATGCACCATTCTTGAGATGGTTACCGGGAAACCGCCGTGGAATGACGTTTCCGGCGACCCTGTTTCGGTGCTTTATCGGGTTGGATTCTCCGGCGAGGCGCCAGAGATTCCGGAATCTGTATCGGAGGAAGTTAAGGACTTCTTGGGGAAGTGCTTGAGGAGTGAAGCGAGTAAGAGATGGACGGTGAAGGAGCTTCTGGGACACGCGTTCGTTGCGGAATCGCGTTTTGTGGGAATAGAATGTGATGAGCATGATTTGGACACACCCACAAGTGTTTTGGAACCACAAGGCCTTTGGAACTGGCACACCAATCAGGACTCGCCACGTGGCATATCTTCAATGAATTCTCCTAGTGCTAGGGACAGAGTTCTTGGGTTGTGTGGTGATGATGAGCCTAACTGGGATCTTAATAATGCTGATGATGATAAGTGGATCACTGTGAGAAGTAATGAGGACTACTCTCCCGTTGGGATAGCTCAGGATTTTTGTTCAGACAATGTTAGGATCCTTAGAGAGGATGATGAGAATGTTTTGGTGAATTTTTATGAACCACCACAGGATGTAGTAGTAATTTGCAATGTAATTCATGAATTGAGTAGATGGAATGATGTAGTAGTTGTTGTTGGTGATTCTTACCTTTGCAGAATCATTGATTGTAAGTGTTGCATTAGAGATTCAGTGTTTTTAGGGTGTTGTTCATCATGTTCATCTCTAAACATTTATTATTATTGTTGTAAGAAGAAAGAAATTTATGTTACGCATGGTCTCCTCTTTAATTCCACTTTGGATGATATGGCTACTTTACAATTTAAATTTCCTATTCTACTTCAATGGAATAATAACGTGTTCCCAATAATGTGA 1437 0.4732 MDYYWTRGHTLGRGSTATVYTAEFHGSGELFAVKSAEVHRSEELRKEQGLLSSLNCPQIVKYKGYDVTYEDGRYFYNLFLEYAPRGTLLDVIAHYNHGGATMEHSLASVYTRQILLGLNYLHSNGIVHCDVKGQNVLITQHGAKIADFGCARKVGSGAGGRGGVIAGTPAFMAPEVARGDEQGFPADVWALGCTILEMVTGKPPWNDVSGDPVSVLYRVGFSGEAPEIPESVSEEVKDFLGKCLRSEASKRWTVKELLGHAFVAESRFVGIECDEHDLDTPTSVLEPQGLWNWHTNQDSPRGISSMNSPSARDRVLGLCGDDEPNWDLNNADDDKWITVRSNEDYSPVGIAQDFCSDNVRILREDDENVLVNFYEPPQDVVVICNVIHELSRWNDVVVVVGDSYLCRIIDCKCCIRDSVFLGCCSSCSSLNIYYYCCKKKEIYVTHGLLFNSTLDDMATLQFKFPILLQWNNNVFPIM 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00649 478 Pfam Protein kinase domain 6 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g00649 478 CDD STKc_MAPKKK 5 263 - -
Arst4g00649 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Arst4g00649 478 Gene3D Transferase(Phosphotransferase) domain 1 2 293 - -
Arst4g00649 478 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 5 344 - -
Arst4g00649 478 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Arst4g00649 478 ProSiteProfiles Protein kinase domain profile. 5 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g00649 478 SUPERFAMILY Protein kinase-like (PK-like) 5 298 IPR011009 -
Arst4g00649 478 SMART serkin_6 5 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00649 Arst-Chr4 4770905 4772445 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00649 5 263 MAP Kinase Kinase Kinase AT2G32510 56.274 7.45e-95 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Arst4g00649 Pkinase 1.9e-54 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02111 8 29817138 29818481 Arst4g00649 4 4770905 4772445 ECH
Arst3g01474 3 13282368 13283608 Arst4g00649 4 4770905 4772445 ECH
Arst4g00649 4 4770905 4772445 Arst4g00649 4 4770905 4772445 ECH