Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00584 ATGGATAAAAAAGAGAGTGATCAATCTGCAACAAGAGGGACAAGCACTCCATCACACACCAAGGTAGTAGCTGGTCCTTCTGTTCCTTCACCTCTCTTAAGAGATCATCAACATTCTCACCATTACATCCACTACCACCACCTGCAACAAGAAGAAGAATTTCACCAAAAACTTCACAACTTTTGGGACAATCAGTACCGTGAAATCGAACAAGCGGCCGATTTCAGGATCCACAGCTTACCCTTGGCTAGAATCAAGAAGATCATGAAGGCTGATGAAAATGTGAAGATGATATCAGCAGAGGCTCCTATTATATTTTCCAAGGCTTGTGAAATGTTCATCATGGAATTGACAATGAGGGCTTGGAATAATGCTGAAGAGAATAAAAGGAGAACACTTCAGAAGAATGACATTGCTGCTGCAGTCACAAAAACTGAGGTGTTTGATTTTCTTGTTGATGTTGTCCCTAGAGATGAAACCGTGGACCTTGGTTTATATGCTGGTATAAGAAGAGGTGGAGGCAATAATAATATTGTTCCTTGCTACTATTATGTGCCACCTCAGCATGTTATGGGTCCACCACCATATGGTCCTCCAAGAGTGCCTATGGTGGGAAGACATGTTCCTAATCAAGATAATATTAATGAGCAGCAAAATAGTGAAAATACTACTCATGCTATGTGTCCAAAGGAGCAAAATCATTCTTCAGATTCAGATGAATGA 723 0.4066 MDKKESDQSATRGTSTPSHTKVVAGPSVPSPLLRDHQHSHHYIHYHHLQQEEEFHQKLHNFWDNQYREIEQAADFRIHSLPLARIKKIMKADENVKMISAEAPIIFSKACEMFIMELTMRAWNNAEENKRRTLQKNDIAAAVTKTEVFDFLVDVVPRDETVDLGLYAGIRRGGGNNNIVPCYYYVPPQHVMGPPPYGPPRVPMVGRHVPNQDNINEQQNSENTTHAMCPKEQNHSSDSDE 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00584 240 MobiDBLite consensus disorder prediction 210 231 - -
Arst4g00584 240 MobiDBLite consensus disorder prediction 1 33 - -
Arst4g00584 240 FunFam Nuclear transcription factor Y subunit gamma 45 157 - -
Arst4g00584 240 SUPERFAMILY Histone-fold 44 151 IPR009072 GO:0046982
Arst4g00584 240 MobiDBLite consensus disorder prediction 205 240 - -
Arst4g00584 240 Pfam Core histone H2A/H2B/H3/H4 66 142 IPR007125 GO:0003677
Arst4g00584 240 Gene3D Histone, subunit A 41 157 IPR009072 GO:0046982
Arst4g00584 240 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 50 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00584 Arst-Chr4 4139360 4141567 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00584 58 191 CCAAT-HAP5 Transcription Factor Family AT1G56170 63.704 1.89e-57 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Arst4g00584 Histone 6.1e-19 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g00584 4 4139360 4141567 Arst4g00584 4 4139360 4141567 ECH