Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00556 ATGGGTGGTCAGGATGTTGCAGACGAGTTTTTGGGTGAATATGAAGATGTCGCGACATTAGATGTGGATGACATAAAGCGGATGCGGTGGGATAGTGTTGACGCTGCTTATGAGTTTTACAGGAGGCTGGGAATGTGTCATGGATTCGGCGTCAGGAAGGGTGATTCAGGCAAAGACTGTAGAGGAAATCTGATTAGATATAGGTTTTTTTGTAACAAGGAAGGGTTGAGGGATGGGAGACACAACGACCGAGTTGATAGACGGAGGGCACACAAACCTGAGACACGAACCAATTGTGAGGCTAAGCTCTCCATATACTTTGATAAGATTGAGCGTTGTTGGAAGGTGCGAAAAGTTGCGACAGAACATAATCACGACTTGACGCCCGCATCAATGGTCCATCTGATAGCCAACCATCGTGAAATGACCGATGCAGCAAAGGCTCAGATTGATGGGTTGCATGCTAGTGGCATTGCGACATCGAAGATTGTTGGATACATGGCCGGAATGGCTGGTGGGTACTCGTTGTTGGGTTTCTTGAAGAAGGATGTGTACAACTACGCCGACAGAACCCGGCGCGCTAACATATCAGATGGCGATGCGAATGCGGCTGTTGTTTATCTGGAGGGAAAGGCTGGTTCGGATCCCATGTCAGTTGCTAGATATAGTGTAACAAAAGACGCAAGGCTGGCAAATTTAATTTGGGCCAATGGAGCTAGTAGAGTTGATTATCAACATTTTGGAGATGTGCTGGCCTTCGACTCGACATATAAGAAAAACAAGTACAAAAAACCTCTTGTGATTTTTTTAGGGTCAAACAACCACAAGCAGACCACAATTTTTGGGTTTGGTCTATTATTTGACGAGAGTGTCAGTTCTTACAAGTGGATGTTAGAAAATCTGCTTGAGGTGATGTGCATGAAGAAACCGTTTGTGGTTGTGACTGACGGGGATAAGGCGATCATAAAGGCAGTTCGATCTGTTCTTCCTGATTCGACACACCGACTGTGTGCCTGGCATATTGAGAAGAATGTTACCTCAAACGTGAAAGATGCAGTTTTACGTAGCTCTTTTAGAAGATGGTTGTATGTTGACATGGAAATAGAGGAGTTCGAGATGGAATGGGAGCGTGCGGTTGCTGAGTATGACCTATATGACAAGGAGTGGGCCACCCAAATGTATGAGAGGAGGATGATGTGGGCAAATGCATATCTGCAAGGCAAGTTTTGCGCCAGTTTCCGGACAACGTCTCGATGTGAAGGGGTTAATGCCTTTGTAAAAAAGTTCTCGAAGACAACGCACACTATACTTGAGTTGGTTCAGAATTTGGAATTGGTGGTCCGGGAGTACCGAAACAAAGATTACTACTCCACTTCAACTCAATGA 1386 0.4531 MGGQDVADEFLGEYEDVATLDVDDIKRMRWDSVDAAYEFYRRLGMCHGFGVRKGDSGKDCRGNLIRYRFFCNKEGLRDGRHNDRVDRRRAHKPETRTNCEAKLSIYFDKIERCWKVRKVATEHNHDLTPASMVHLIANHREMTDAAKAQIDGLHASGIATSKIVGYMAGMAGGYSLLGFLKKDVYNYADRTRRANISDGDANAAVVYLEGKAGSDPMSVARYSVTKDARLANLIWANGASRVDYQHFGDVLAFDSTYKKNKYKKPLVIFLGSNNHKQTTIFGFGLLFDESVSSYKWMLENLLEVMCMKKPFVVVTDGDKAIIKAVRSVLPDSTHRLCAWHIEKNVTSNVKDAVLRSSFRRWLYVDMEIEEFEMEWERAVAEYDLYDKEWATQMYERRMMWANAYLQGKFCASFRTTSRCEGVNAFVKKFSKTTHTILELVQNLELVVREYRNKDYYSTSTQ 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00556 461 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 23 457 IPR031052 GO:0006355
Arst4g00556 461 Pfam FAR1 DNA-binding domain 38 128 IPR004330 -
Arst4g00556 461 Pfam MULE transposase domain 250 344 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00556 Arst-Chr4 3840634 3842019 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst4g00556 MULE 1.2e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00556 - - ahf:112711056 907.131