Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00555 ATGATTATCTCGGTATCTGGCTCCTCAGCTTGCAAACAAGTACAAGAGCCTCTAGTAAGTTTCCAAAAGGGATTTACAAACATGTTATATAATCGGAACAATAATAATAAGGATAAGGTGGTGGTGATATTGGGGGCCACCGGAACCGGAAAGACCAAGTTGGCCATAGACCTTGCCAACCACTTCCCACCGGCTGAGATTGTTAACTCCGACAAAATGCAAGTCTACAAGGGCCTTGACATCACCACTAATAAGGTTACTCCTCAAGAGGCTCGTGGGGTCCCACATCATCTACTTGGCACAATTCACCCCAATGCCAACTTCACCGCCCATGATTTTTGCCGCCAAGCCACCTCCGCCGTCGATTCCATCGTTGCTCGAGATGCCCTCCCCATCATCGCCGGTGGCTCCAATTCCTATCTTGATGCTCTCATCAACCACCACTCCACCTTTAGATTAAGGTACGAGTGTTGCTTCCTATGGGTGGATGTTTCAATCCCCATACTGCATGCGTCGCTTCGATCACGCGTGGATCGCATGATCGAAGCGGGACAAGTGGAGGAAGTGCGGAAATTCTTCGAGCCATTGGCAGATTACGAGAGGGGAATAAGAAGAGCGATAGGGGTGCCAGAGTTCAACGAGTTTCTAAGAGCAGAGGCCTTAGGAGCAGATGAAGAGACAAAGAAGATGCTCTTAGACATAGCCATTGCAAGAATCAAGGTCAACAACTGCACCCTCGCCAATCGCCAAATCCACAAGATTCAGCGACTCCACAACACCTGGAAGAGGACCATGCATCGCCTCGACGCCACGCAGGTTTTCTTGAACCGTAATTCCTCTGATCATCACCAATCTCAAAATTCCTGGGAGGAGCATGTTCTTGCCAAGAGCCTTAGGATTCTTCACAACTTCCTCTACGAGGATAACAATAAACATCTTCTTGTTCCTTCCGGAATTAATGTTTCTTCTTCTTCGCCGCCGGTGGCAATGGCTGCCGTGGCCGCAGCCGCCACGCATTAG 1020 0.4931 MIISVSGSSACKQVQEPLVSFQKGFTNMLYNRNNNNKDKVVVILGATGTGKTKLAIDLANHFPPAEIVNSDKMQVYKGLDITTNKVTPQEARGVPHHLLGTIHPNANFTAHDFCRQATSAVDSIVARDALPIIAGGSNSYLDALINHHSTFRLRYECCFLWVDVSIPILHASLRSRVDRMIEAGQVEEVRKFFEPLADYERGIRRAIGVPEFNEFLRAEALGADEETKKMLLDIAIARIKVNNCTLANRQIHKIQRLHNTWKRTMHRLDATQVFLNRNSSDHHQSQNSWEEHVLAKSLRILHNFLYEDNNKHLLVPSGINVSSSSPPVAMAAVAAAATH 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00555 339 FunFam Adenylate isopentenyltransferase 5, chloroplastic 166 265 - -
Arst4g00555 339 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 37 304 IPR039657 -
Arst4g00555 339 Pfam IPP transferase 153 252 - -
Arst4g00555 339 Pfam IPP transferase 74 148 - -
Arst4g00555 339 Gene3D - 37 305 IPR027417 -
Arst4g00555 339 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 166 265 - -
Arst4g00555 339 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 198 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00555 Arst-Chr4 3766634 3769018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00555 154 305 C2H2 Transcription Factor Family AT2G27760 29.213 9.77e-18 82.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g00555 4 3766634 3769018 Arst4g00555 4 3766634 3769018 ECH
Arst1g03548 1 96781994 96783440 Arst4g00555 4 3766634 3769018 PCT