Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00529 ATGATTTTGAAGGAGAACCCTGTAGGTACTGAGCTTGCAATGAGTAATATCAATGTGGAGGAGGAAATAGATTTTTCATGTGAACCGTACATTGGTTTGGAATTTGACTCACCGGATGATGCACTCAAGTTCTACACGTCATATGCAAATCGAGTTGGATTTAAAGTTCGGATTGGTCAGCTGTATCGATCAAGATCAAATGGGTCAGTTTCTTCTCGAAGATATGTGTGCTCAAAGGAGGGATATCAGCTCAGTTCGAGAACAGGTTGTCCAGCATTCATAAGAGTGCAAATAAATGCTTCTGGAAAGTGGGTTGTTGATCATTTCCAAAAGGATCACAATCATGATCTTGAAATTGAAAATGGAAATTGCACACCAACAGTGCAGCAGAAAGGTGCTGCAGCTTTCAAGTCCTTTACTGAAGTATCCCGTAGGCCAAGGAAGAAATTGCTTGAATCCTGTAATGAATCTTCTGGTCCCATGGGCATTATTGATTTCAAGCGACTGAGAAAGGAAGAACTCGAAGGACAGTTCCGAACTGAACCATATGTAGGTCAAGAGTTTGGTTCACCCAATGAAGCCTACCAATTTTATCATGCATATGCAGCATATGTTGGTTTTGGAGTTCGAATTGGTCAATTATTTCGTTCTAAGAATGATGGATTGATCACATCCCGCCGATTTGTGTGCTCAAAAGAAGGGTTCCAGCACCCTTCACGGGTTGGGTGCGGGGCCTATTTGAGGATTAAGAGACAGCCATCGGGAAAGTGGGTGGTGGACCGTCTCCACAAAGATCATAATCATGATTTGGGCTCTGAAAGGGAGGGTAGGCCAAAAAGTATTCCTGATTCCAATATTTTGGCTGAAGAGGTAGATACTGGATTCGTAAATGGTGATTTATTTCGGATAGACAACTATCCTGTCCCCAGAGGAACTAGACAAAATCACATTAAAAGTGATTGGTACAGCATGCTTCTAGAGTATTTTCAATCAAGACAAGCAGAAGATACAGGATTCTTTTATGCTGTGGAAGTTGACAATGGTAACTGTATGAGCCTATTTTGGGCTGATGGCAGATCTAGATATTCATGTAGTCAGTTTGGTGATGTCCTTGTTATTGACACTTCCTACCGTAAGAGTGTCTATTTGGTGCCGTTTGCCACCTTTATTGGAGTTAACCATCACAGGCAACCTGTGCTTCTTGGAAGTGCTTTGATTGCTGATGAATCTGAAGAGTCTTTCGCGTGGTTATTTCAGACATGGCTGAGGGCAGCATCTGGCCGGCAGCCTCTATCGATAATTGCTGATCAGGACATTGCAATCCAGAGGGCAATAAGAAAAGTCTTTCCAAGAACCCATCATCGCTTTTCATTGTGGCAAATCAAGGCAAAGGAACAAGAGAATTTGGGTATAATGGGTGATGGATTTACAAAAGATTATGACAAATGCATTTACCAGAGTCAGACCGTTGATGAATTTGACGCCACATGGGCTGCCTTACTCAACAAATATGGACTGAAGGACAATCCTTGGCTAAAAGAAATGTATGAGAAGCGGGCATCCTGGGTTCCATTATATTTAAGGGGCACGTTTTTTGCTGGCATACCCATGAATGAAAGTGTTGATTCATTCTTTGGTGCAATTTTAAATGGCCAAACGTCTCTCGTGGAATTTATTCCAAGGTATGAAAGAGGTCTTGAGCGACGCCGGGAGGAAGAAAGAAACGAGGATTTCAATACTTCTAATTTTCAACCATTTTTGCAAACAAAGGAGCCAGTTGAAGAACAATGTAGAAGGCTTTACACTCTTACCATATTCAAAGTACTTCAAAAAGAGCTTTTGCAGTGCTATAGTTATCTTGGGTTTAAAGCTTTTCAAGAAGGGAGCATCAGCCGATATATGGTGCGTAAGGGTGGAAATGATATGGAGAAACACCATATAGTTACATTTAATGCATCTAATCTTAGCATTAGTTGTAGCTGTCAGATGTTTGAATATGAAGGTGTTCTTTGTAGACATGCTTTGAGGGTTTTCCAGATACTGGAATTAAGAGAAGTTCCTTCTCGCTACATCTTGCACAGATGGACTAAAAATGCTGAGGATGGTGTTTTCCCTGATTTAGAGTCATGGAGTAGTTCTCAGGAACTCCGGAGTTTGATGCTATGGAGTCTAAGAGAAACTGCGGCTAAGTACATAGATGCAGGTGCAACATCTATTGAAAAGTATAAACTTGCTTATGAGATTTTGCGTGAGGGTGGGAGAAAGCTTTGTTGGCACAGGTGA 2283 0.4144 MILKENPVGTELAMSNINVEEEIDFSCEPYIGLEFDSPDDALKFYTSYANRVGFKVRIGQLYRSRSNGSVSSRRYVCSKEGYQLSSRTGCPAFIRVQINASGKWVVDHFQKDHNHDLEIENGNCTPTVQQKGAAAFKSFTEVSRRPRKKLLESCNESSGPMGIIDFKRLRKEELEGQFRTEPYVGQEFGSPNEAYQFYHAYAAYVGFGVRIGQLFRSKNDGLITSRRFVCSKEGFQHPSRVGCGAYLRIKRQPSGKWVVDRLHKDHNHDLGSEREGRPKSIPDSNILAEEVDTGFVNGDLFRIDNYPVPRGTRQNHIKSDWYSMLLEYFQSRQAEDTGFFYAVEVDNGNCMSLFWADGRSRYSCSQFGDVLVIDTSYRKSVYLVPFATFIGVNHHRQPVLLGSALIADESEESFAWLFQTWLRAASGRQPLSIIADQDIAIQRAIRKVFPRTHHRFSLWQIKAKEQENLGIMGDGFTKDYDKCIYQSQTVDEFDATWAALLNKYGLKDNPWLKEMYEKRASWVPLYLRGTFFAGIPMNESVDSFFGAILNGQTSLVEFIPRYERGLERRREEERNEDFNTSNFQPFLQTKEPVEEQCRRLYTLTIFKVLQKELLQCYSYLGFKAFQEGSISRYMVRKGGNDMEKHHIVTFNASNLSISCSCQMFEYEGVLCRHALRVFQILELREVPSRYILHRWTKNAEDGVFPDLESWSSSQELRSLMLWSLRETAAKYIDAGATSIEKYKLAYEILREGGRKLCWHR 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00529 760 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 16 126 IPR031052 GO:0006355
Arst4g00529 760 SMART 26again6 657 684 IPR006564 GO:0008270
Arst4g00529 760 Pfam SWIM zinc finger 653 679 IPR007527 GO:0008270
Arst4g00529 760 ProSiteProfiles Zinc finger SWIM-type profile. 646 682 IPR007527 GO:0008270
Arst4g00529 760 Pfam FAR1 DNA-binding domain 196 270 IPR004330 -
Arst4g00529 760 Pfam FAR1 DNA-binding domain 43 117 IPR004330 -
Arst4g00529 760 Pfam MULE transposase domain 370 463 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00529 Arst-Chr4 3547708 3550899 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst4g00529 MULE 3.7e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00529 - - vra:111242705 1321.22