Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00496 ATGGCCGATTTGCTCCCTCTTTCCTCTGGTTCTATTCTCAGGACAAAAGGGGGTGAAGCAAAGGAAAGGCCTGCAAGACGCACCGATACCGCTGTGAAGAGTTGTCGCCACAACGCGCTGCACCTCCATTCTGGGTCTTTCCTATCTGAAGAATCAAAAGACCCTGTGGTTCAGTTTCTGGAAGGAGAACTTCTCATAGTGTGTTTGTATTCCAATCCAGGTGGACGCTTTGCCTCAAGGGAAAAAATGAGCCTTCTAAAGAACTGCCGAAGTTTTCTGTCAAACTTTTTCTTCATTCCAGTGGGCATGTTGCAGCGAAATTCCAATATGACCAGGTTATGGATGTTCCCGCTTTCTTCCTTGTCCGAAGCAGAGAAGGTTCTAGGAGAAATATCTAATTATAAAGTTCAGTTGGAGGCGGTAAAAGCCAAAATCAAATCTGCTAAATCAAAAGATGAGTCTGAATCTCTTAAATTTACTCAAAAGAAACTGATTAACAAGGCAGGTTGCAAGTTTCTTATATTTGCGCACCATCAGCCAATGATAGATGCGATACATGAGTGCCTTCTTAAGAAAAAAGTGGGTTGCATTTGGATTGATGGAGGTACACCCGCTGCATCAGGGCAACAATTGGTTACAGATTTCCAGGAAAAGGATTATATCAAGGCAGCTGTACTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAACAATCCTGGACTCCAGGTGACCTAATTCAGGCCAAAGATCGTGCATATAGAATTGGTCAGGTATTCTCACACTCATTAAGTAGAAAGGAGAGAGTTGTTACTAGTTGCATGACAACATTAAGAAAACAGATAATCTCAAATGAAAAGAACTCTCATATCTAA 903 0.4186 MADLLPLSSGSILRTKGGEAKERPARRTDTAVKSCRHNALHLHSGSFLSEESKDPVVQFLEGELLIVCLYSNPGGRFASREKMSLLKNCRSFLSNFFFIPVGMLQRNSNMTRLWMFPLSSLSEAEKVLGEISNYKVQLEAVKAKIKSAKSKDESESLKFTQKKLINKAGCKFLIFAHHQPMIDAIHECLLKKKVGCIWIDGGTPAASGQQLVTDFQEKDYIKAAVLSIKAGGVGLTLTAASTVIFTEQSWTPGDLIQAKDRAYRIGQVFSHSLSRKERVVTSCMTTLRKQIISNEKNSHI 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00496 300 Gene3D - 97 289 IPR027417 -
Arst4g00496 300 Coils Coil 124 151 - -
Arst4g00496 300 CDD SF2_C_SNF 167 267 - -
Arst4g00496 300 Pfam Helicase conserved C-terminal domain 166 266 IPR001650 -
Arst4g00496 300 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 142 268 - -
Arst4g00496 300 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 268 IPR027417 -
Arst4g00496 300 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 160 300 IPR001650 -
Arst4g00496 300 SMART helicmild6 183 266 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00496 Arst-Chr4 3336671 3342109 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00496 170 290 RAD5 or RAD16-like Gene Family AT1G02670 32.520 6.89e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00496 K14440 - adu:107482564 579.326