Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00495 ATGGCCGATTTGCTCCCTCTTTCCTCTGGTTCTATTCTCAGGACAAAAGGGGGTGAAGCAAAGGAAAGGCCTGCAAGACGCACCGATACCGCTGTGAAGAGTTGTCGCCACAACGCGCTGCACCTCCATTCTGGGTCTTTCCTATCTGAAGAATCAAAAGACCCTGTGGTTCAGTTTCTGGAAGGAGAACTTCTCATAGTGTGTTTGTATTCCAATCCAGGTGGACGCTTTGCCTCAAGGGAAAAAATGAGCCTTCTAAAGAACTGCCGAAGTTTTCTGTCAAACTTTTTCTTCATTCCAGTGGGCATGTTGCAGCGAAATTCCAATATGACCAGGTTATGGATGTTCCCGCTTTCTTCCTTGTCCGAAGCAGAGAAGGTTCTAGGAGAAATATCTAATTATAAAGTTCAGTTGGAGGCGGTAAAAGCCAAAATCAAATCTGCTAAATCAAAAGATGAGTCTGAATCTCTTAAATTTACTCAAAAGAAACTGATTAACAAGAAGAAAAAAGTGGGTTGCATTTGGATTGATGGAGGTACACCCGCTGCATCAGGGCAACAATTGGTTACAGATTTCCAGGAAAAGGATTATATCAAGGCAGCTGTACTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAACAATCCTGGACTCCAGGTGACCTAATTCAGGCCAAAGATCGTGCATATAGAATTGGTCAGGTATTCTCACACTCATTAAGTAGAAAGGAGAGAGTTGTTACTAGTTGCATGACAACATTAAGAAAACAGATAATCTCAAATGAAAAGAACTCTCATATCTAA 834 0.4173 MADLLPLSSGSILRTKGGEAKERPARRTDTAVKSCRHNALHLHSGSFLSEESKDPVVQFLEGELLIVCLYSNPGGRFASREKMSLLKNCRSFLSNFFFIPVGMLQRNSNMTRLWMFPLSSLSEAEKVLGEISNYKVQLEAVKAKIKSAKSKDESESLKFTQKKLINKKKKVGCIWIDGGTPAASGQQLVTDFQEKDYIKAAVLSIKAGGVGLTLTAASTVIFTEQSWTPGDLIQAKDRAYRIGQVFSHSLSRKERVVTSCMTTLRKQIISNEKNSHI 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00495 277 SMART helicmild6 158 243 IPR001650 -
Arst4g00495 277 Coils Coil 124 151 - -
Arst4g00495 277 CDD SF2_C_SNF 176 244 - -
Arst4g00495 277 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 161 245 - -
Arst4g00495 277 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 133 277 IPR001650 -
Arst4g00495 277 Pfam Helicase conserved C-terminal domain 156 243 IPR001650 -
Arst4g00495 277 Gene3D - 124 267 IPR027417 -
Arst4g00495 277 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 245 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00495 Arst-Chr4 3336671 3342109 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00495 137 267 RAD5 or RAD16-like Gene Family AT1G02670 31.206 1.07e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00495 K14440 - adu:107482564 516.538