Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00494 ATGGCCGATTTGCTCCCTCTTTCCTCTGGTTCTATTCTCAGGACAAAAGGGGGTGAAGCAAAGGAAAGGCCTGCAAGACGCACCGATACCGCTGTGAAGAGTTGTCGCCACAACGCGCTGCACCTCCATTCTGGGTCTTTCCTATCTGAAGAATCAAAAGACCCTGTGGTTCAGTTTCTGGAAGGAGAACTTCTCATAGTGTGTTTGTATTCCAATCCAGGTGGACGCTTTGCCTCAAGGGAAAAAATGAGCCTTCTAAAGAACTGCCGAAGTTTTCTGTCAAACTTTTTCTTCATTCCAGTGGGCATGTTGCAGCGAAATTCCAATATGACCAGGTTATGGATGTTCCCGCTTTCTTCCTTGTCCGAAGCAGAGAAGGTTCTAGGAGAAATATCTAATTATAAAGTTCAGGCAGGTTGCAAGTTTCTTATATTTGCGCACCATCAGCCAATGATAGATGCGATACATGAGTGCCTTCTTAAGAAAAAAGTGGGTTGCATTTGGATTGATGGAGGTACACCCGCTGCATCAGGGCAACAATTGGTTACAGATTTCCAGGAAAAGGATTATATCAAGGCAGCTGTACTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAACAATCCTGGACTCCAGGTGACCTAATTCAGGCCAAAGATCGTGCATATAGAATTGGTCAGGTATTCTCACACTCATTAAGTAGAAAGGAGAGAGTTGTTACTAGTTGCATGACAACATTAAGAAAACAGATAATCTCAAATGAAAAGAACTCTCATATCTAA 813 0.4293 MADLLPLSSGSILRTKGGEAKERPARRTDTAVKSCRHNALHLHSGSFLSEESKDPVVQFLEGELLIVCLYSNPGGRFASREKMSLLKNCRSFLSNFFFIPVGMLQRNSNMTRLWMFPLSSLSEAEKVLGEISNYKVQAGCKFLIFAHHQPMIDAIHECLLKKKVGCIWIDGGTPAASGQQLVTDFQEKDYIKAAVLSIKAGGVGLTLTAASTVIFTEQSWTPGDLIQAKDRAYRIGQVFSHSLSRKERVVTSCMTTLRKQIISNEKNSHI 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00494 270 Gene3D - 78 260 IPR027417 -
Arst4g00494 270 CDD SF2_C_SNF 126 237 - -
Arst4g00494 270 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 125 238 IPR027417 -
Arst4g00494 270 Pfam Helicase conserved C-terminal domain 135 236 IPR001650 -
Arst4g00494 270 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 123 270 IPR001650 -
Arst4g00494 270 SMART helicmild6 153 236 IPR001650 -
Arst4g00494 270 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 133 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00494 Arst-Chr4 3336671 3342109 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00494 140 260 RAD5 or RAD16-like Gene Family AT1G02670 32.520 3.46e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00494 K14440 - adu:107482564 523.472